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Information on SUBCLASS 3.4.13
Subclass Accession number: 2928
Subclass: 3.4.13 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 9.1 +/- 0.0
Average RMSD (Å) : 0.500 +/- 0.000

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XpXhAXX
(φψ)-conformation: pbappaa
Pattern: [VY][FL][AN][AF][AE][DV][AE][HL][EP][ST][AS][LV][A][PQ][AE][EK][L][FL][KN]x[LT][QT]
Conservation:-0.0450.287-1.041-1.041-0.709-1.705-0.709-1.0410.2870.6190.2870.2872.2780.287-0.7090.9512.2780.2870.619-0.377-0.709-0.377
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f9y_A_531f9y   A5374YLNAAVALETSLAPEELLNHTQEEEEEEEEEE-S-HHHHHHHHHxxbbbbxbxbaxxaaaaaaaaa
1ifv_A_21ifv   A223VFAFEDEHPSAVAQAKLFKALTEEEEEEEEEESS-HHHHHHHHHbbbbbbbbwbaxxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f9y_A_531f9y   A     HHR6-HYDROXYMETHYLPTERIN Y - 53
1f9y_A_531f9y   A     HHR6-HYDROXYMETHYLPTERIN L - 54
1f9y_A_531f9y   A     HHR6-HYDROXYMETHYLPTERIN N - 55
1f9y_A_531f9y   A     ACTACETATE ION E - 61
1f9y_A_531f9y   A     ACTACETATE ION T - 62
1f9y_A_531f9y   A     ACTACETATE ION S - 63
1f9y_A_531f9y   A     APCDIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER L - 70
1f9y_A_531f9y   A     APCDIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER T - 73
1f9y_A_531f9y   A     APCDIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER Q - 74
1f9y_A_531f9y   A     MGMAGNESIUM ION E - 77
1f9y_A_531f9y   A     APCDIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER E - 77

Clusters included in this Subclass
CLUSTER: EH.4.318