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Information on SUBCLASS 4.1.1
Subclass Accession number: 1242
Subclass: 4.1.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 51734 (>50 %)  51734 (>75 %)  51735 (>50 %)  51735 (>75 %)  51751 (>75 %)  51751 (>75 %)  
Number of loops: 40

Average sequence ID (%) : 16.1 +/- 16.8
Average RMSD (Å) : 0.548 +/- 0.230

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XhchppXX
(φψ)-conformation: bbpaapaa
Pattern: [afgilptv]xx[acgiklmtv][cdnqrst][afilmpvy][adegnqrst][deknrst]x[adegknqst]x[ailmvw][adeknqrst]
Conservation:-0.606-0.381-0.752-0.7222.2750.856-0.3151.678-0.704-0.450-0.8750.235-0.241
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1azs_C_3591azs   C361373PHFTCAVDTENIREEE--TT-HHHHHwbxbbaaxaaaaa
1bdb_*_531bdb   -5567GIVGDVRSLEDQKEEE--TT-HHHHHbbxbbaaxaaaaa
1byk_A_641byk   A6779IIVTRLDSLSENLEEES-TT-HHHHHbbxabaaxaaaaa
1cip_A_3191cip   A321333THFTCATDTKNVQEEE--TT-HHHHHxbxbbaaxaaaaa
1cyd_A_551cyd   A5668PVCVDLGDWDATEEEE--TT-HHHHHwbbbxaaxaaaaa
1drk_*_31drk   -618LVVSTLNNPFFVSEEES-SSSHHHHHbbbabaabaaaaa
1ej0_A_931ej0   A95107FLQGDFRDELVMKEEES-TTSHHHHHbbxbxaaxaaaaa
1ek6_A_611ek6   A6274FEEMDILDQGALQEEE--TT-HHHHHbbxbbaaxaaaaa
1eny_*_601eny   -6072LLELDVQNEEHLAEEE--TT-HHHHHbbxbxaabaaaaa
1ff9_A_491ff9   A5163PISLDVNDDAALDEEE--TT-HHHHHwbbbxaaxaaaaa
1fjh_A_381fjh   A3849.VIADLSTAEGRK.EE--TTSHHHHH.bxbbaabaaaaa
1fmc_A_621fmc   A6476ACRCDITSEQELSEEE--TT-HHHHHbbxbbaabaaaaa
1gc0_A_1311gc0   A132144LRHVDMADLQALEEEEE-TT-HHHHHbbxbxaabaaaaa
1geg_A_531geg   A5567AVKVDVSDRDQVFEEE--TTSHHHHHxbxbbaabaaaaa
1gud_A_31gud   A618VVLKTLSNPFWVDEEES-SSSHHHHHbbbabaabaaaaa
1gy8_A_701gy8   A7183LEVGDVRNEDFLNEEES-TT-HHHHHbbxexaaxaaaaa
1h5q_A_631h5q   A6577AYQCDVSNTDIVTEEE--TT-HHHHHxbxbxaaxaaaaa
1hdc_A_541hdc   A5668YQHLDVTIEEDWQEEE--TT-HHHHHbbxbbaabaaaaa
1itw_A_4841itw   A485497VFWLDPARAHDAQEEE--TTSHHHHHbxxbxaaxaaaaa
1iy8_A_661iy8   A6880TTVADVSDEAQVEEEE--TTSHHHHHbbxbxaabaaaaa
1izc_A_971izc   A99111IVRVPKHDEVSLSEEE--TT-HHHHHbbxbxaaxaaaaa
1ja9_A_811ja9   A8395AIQADISKPSEVVEEE--TTSHHHHHxbxbxaabaaaaa
1jtv_A_591jtv   A6173TLQLDVRDSKSVAEEE--TT-HHHHHbbxbbaabaaaaa
1k2w_A_531k2w   A5567AIALDVTDQASIDEEE--TT-HHHHHxbxbbaabaaaaa
1kjq_A_551kjq   A5668SHVINMLDGDALREEE--TT-HHHHHbbbbxaaxaaaaa
1lrz_A_771lrz   A7787..VIDYENQELVH..EE-TT-HHHHH..bbxaaxaaaaa
1n5d_A_571n5d   A5870FHQLDIIDLQSIREEE--TT-HHHHHbbxbbaaxaaaaa
1nxq_A_561nxq   A5870FFQHDSSDEDGWTEEE--TT-HHHHHbbxbbaaxaaaaa
1oaa_*_631oaa   -6678LAAADLGTEAGVQEEE--TTSHHHHHbbxbxaabaaaaa
1orr_A_531orr   A5466FVHGDIRNKNDVTEEE--TT-HHHHHbbxbbaaxaaaaa
1q7c_A_531q7c   A5567GLMLNVTDPASIEEEE--TT-HHHHHbbxbbaabaaaaa
1qsg_A_601qsg   A6072VLQCDVAEDASIDEEE--TT-HHHHHbbxbbaabaaaaa
1qyc_A_591qyc   A6072IVHGSIDDHASLVEE---TT-HHHHHxbxbbaabaaaaa
1r6d_A_571r6d   A5971FVHGDIRDAGLLAEEE--TT-HHHHHxbxbbaaxaaaaa
1rjd_A_1691rjd   A171183LAACDLNDITETTEEE--TT-HHHHHbbxbxaabaaaaa
1rkx_A_601rkx   A6173SEIGDIRDQNKLLEEE--TT-HHHHHbbxbxaaxaaaaa
1spx_A_601spx   A6274SVVADVTTDAGQDEEE--TTSHHHHHxbxbxaabaaaaa
1uay_A_421uay   A4355YVEGDVTREEDVREEE--TT-HHHHHbbxbbaabaaaaa
2ae1_*_602ae1   -6274ASVCDLSSRSERQEEE--TT-HHHHHbbxbbaaxaaaaa
8abp_*_38abp   -719FLVKQPEEPWFQTEEES-TTSHHHHHbbbabaaxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1azs_C_3591azs   C     GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE T - 364
1azs_C_3591azs   C     GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE C - 365
1azs_C_3591azs   C     GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE A - 366
1azs_C_3591azs   C     GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE V - 367
1azs_C_3591azs   C     GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE D - 368
1bdb_*_531bdb   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 58
1bdb_*_531bdb   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 59
1bdb_*_531bdb   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 60
1bdb_*_531bdb   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 61
1byk_A_641byk   A     T6PTREHALOSE-6-PHOSPHATE T - 70
1byk_A_641byk   A     T6PTREHALOSE-6-PHOSPHATE R - 71
1byk_A_641byk   A     T6PTREHALOSE-6-PHOSPHATE D - 73
1byk_A_641byk   A     T6PTREHALOSE-6-PHOSPHATE S - 74
1byk_A_641byk   A     T6PTREHALOSE-6-PHOSPHATE L - 75
1byk_A_641byk   A     T6PTREHALOSE-6-PHOSPHATE S - 76
1byk_A_641byk   A     T6PTREHALOSE-6-PHOSPHATE E - 77
1cip_A_3191cip   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER T - 324
1cip_A_3191cip   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER C - 325
1cip_A_3191cip   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER A - 326
1cip_A_3191cip   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER T - 327
1cyd_A_551cyd   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 59
1cyd_A_551cyd   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE D - 60
1cyd_A_551cyd   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 61
1cyd_A_551cyd   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 62
1drk_*_31drk   *     RIPRIBOSE(PYRANOSE FORM) S - 9
1drk_*_31drk   *     RIPRIBOSE(PYRANOSE FORM) N - 13
1drk_*_31drk   *     RIPRIBOSE(PYRANOSE FORM) F - 15
1drk_*_31drk   *     RIPRIBOSE(PYRANOSE FORM) F - 16
1drk_*_31drk   *     RIPRIBOSE(PYRANOSE FORM) L - 19
1ej0_A_931ej0   A     HGMERCURY (II) ION L - 96
1ej0_A_931ej0   A     HGMERCURY (II) ION Q - 97
1ej0_A_931ej0   A     HGMERCURY (II) ION G - 98
1ej0_A_931ej0   A     SAMS-ADENOSYLMETHIONINE G - 98
1ej0_A_931ej0   A     HGMERCURY (II) ION D - 99
1ej0_A_931ej0   A     SAMS-ADENOSYLMETHIONINE D - 99
1ej0_A_931ej0   A     HGMERCURY (II) ION F - 100
1ej0_A_931ej0   A     SAMS-ADENOSYLMETHIONINE F - 100
1ej0_A_931ej0   A     SAMS-ADENOSYLMETHIONINE R - 101
1ej0_A_931ej0   A     HGMERCURY (II) ION V - 105
1ej0_A_931ej0   A     HGMERCURY (II) ION L - 109
1ek6_A_611ek6   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE M - 65
1ek6_A_611ek6   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE D - 66
1ek6_A_611ek6   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE I - 67
1ek6_A_611ek6   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE L - 68
1eny_*_601eny   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 63
1eny_*_601eny   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 64
1eny_*_601eny   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 65
1eny_*_601eny   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Q - 66
1fmc_A_621fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE C - 67
1fmc_A_621fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 68
1fmc_A_621fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 69
1fmc_A_621fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 70
1geg_A_531geg   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 58
1geg_A_531geg   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 61
1geg_A_531geg   A     GLCGLUCOSE R - 63
1geg_A_531geg   A     GLCGLUCOSE D - 64
1geg_A_531geg   A     GLCGLUCOSE Q - 65
1geg_A_531geg   A     GLCGLUCOSE F - 67
1geg_A_531geg   A     GLCGLUCOSE A - 68
1gud_A_31gud   A     ZNZINC ION E - 3
1gy8_A_701gy8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 74
1gy8_A_701gy8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 75
1gy8_A_701gy8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 76
1gy8_A_701gy8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 77
1h5q_A_631h5q   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C - 68
1h5q_A_631h5q   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE D - 69
1h5q_A_631h5q   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 70
1h5q_A_631h5q   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 71
1iy8_A_661iy8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 71
1iy8_A_661iy8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 72
1iy8_A_661iy8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 73
1iy8_A_661iy8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 74
1izc_A_971izc   A     MGMAGNESIUM ION R - 101
1izc_A_971izc   A     PYRPYRUVIC ACID R - 101
1ja9_A_811ja9   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 86
1ja9_A_811ja9   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE D - 87
1ja9_A_811ja9   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 88
1ja9_A_811ja9   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 89
1kjq_A_551kjq   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID R - 55
1kjq_A_551kjq   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID S - 56
1kjq_A_551kjq   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID H - 57
1kjq_A_551kjq   A     EDO1,2-ETHANEDIOL N - 60
1kjq_A_551kjq   A     EDO1,2-ETHANEDIOL L - 62
1kjq_A_551kjq   A     EDO1,2-ETHANEDIOL D - 63
1kjq_A_551kjq   A     EDO1,2-ETHANEDIOL G - 64
1kjq_A_551kjq   A     EDO1,2-ETHANEDIOL D - 65
1kjq_A_551kjq   A     EDO1,2-ETHANEDIOL A - 66
1kjq_A_551kjq   A     EDO1,2-ETHANEDIOL L - 67
1kjq_A_551kjq   A     EDO1,2-ETHANEDIOL R - 69
1kjq_A_551kjq   A     EDO1,2-ETHANEDIOL V - 70
1kjq_A_551kjq   A     EDO1,2-ETHANEDIOL E - 72
1kjq_A_551kjq   A     EDO1,2-ETHANEDIOL L - 73
1n5d_A_571n5d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 61
1n5d_A_571n5d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE D - 62
1n5d_A_571n5d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 63
1n5d_A_571n5d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 64
1oaa_*_631oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 69
1oaa_*_631oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE D - 70
1oaa_*_631oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 71
1oaa_*_631oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 72
1oaa_*_631oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 73
1orr_A_531orr   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 57
1orr_A_531orr   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 58
1orr_A_531orr   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 59
1orr_A_531orr   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 60
1q7c_A_531q7c   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 58
1q7c_A_531q7c   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE N - 59
1q7c_A_531q7c   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 60
1q7c_A_531q7c   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 61
1qsg_A_601qsg   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE C - 63
1qsg_A_601qsg   A     GLCGLUCOSE A - 66
1qsg_A_601qsg   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 66
1r6d_A_571r6d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 62
1r6d_A_571r6d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 63
1r6d_A_571r6d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 64
1r6d_A_571r6d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 65
1rjd_A_1691rjd   A     SAMS-ADENOSYLMETHIONINE C - 174
1rjd_A_1691rjd   A     SAMS-ADENOSYLMETHIONINE D - 175
1rjd_A_1691rjd   A     SAMS-ADENOSYLMETHIONINE L - 176
1rjd_A_1691rjd   A     SAMS-ADENOSYLMETHIONINE N - 177
1rkx_A_601rkx   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 64
1rkx_A_601rkx   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 65
1rkx_A_601rkx   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 66
1rkx_A_601rkx   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 67
1uay_A_421uay   A     ADNADENOSINE G - 46
1uay_A_421uay   A     ADNADENOSINE D - 47
1uay_A_421uay   A     ADNADENOSINE V - 48
1uay_A_421uay   A     ADNADENOSINE T - 49
8abp_*_38abp   *     GLAALPHA D-GALACTOSE K - 10
8abp_*_38abp   *     GLBBETA-D-GALACTOSE K - 10
8abp_*_38abp   *     GLAALPHA D-GALACTOSE Q - 11
8abp_*_38abp   *     GLBBETA-D-GALACTOSE Q - 11
8abp_*_38abp   *     GLAALPHA D-GALACTOSE E - 14
8abp_*_38abp   *     GLBBETA-D-GALACTOSE E - 14
8abp_*_38abp   *     GLAALPHA D-GALACTOSE W - 16
8abp_*_38abp   *     GLBBETA-D-GALACTOSE W - 16
8abp_*_38abp   *     GLAALPHA D-GALACTOSE F - 17
8abp_*_38abp   *     GLBBETA-D-GALACTOSE F - 17
8abp_*_38abp   *     GLAALPHA D-GALACTOSE E - 20
8abp_*_38abp   *     GLBBETA-D-GALACTOSE E - 20
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gud_A_31gud   A ZN3ZN BINDING SITE FOR CHAIN AE - 3
1gy8_A_701gy8   A AC1NAD BINDING SITE FOR CHAIN AG - 74
1gy8_A_701gy8   A AC1NAD BINDING SITE FOR CHAIN AD - 75
1h5q_A_631h5q   A AC1NAP BINDING SITE FOR CHAIN AC - 68
1h5q_A_631h5q   A AC1NAP BINDING SITE FOR CHAIN AD - 69

Clusters included in this Subclass
CLUSTER: EH.4.37
CLUSTER: EH.4.8
CLUSTER: EH.5.147
CLUSTER: EH.5.5
CLUSTER: EH.6.180
CLUSTER: EH.6.2
CLUSTER: EH.6.52