Information on SUBCLASS 4.1.1 |
Subclass Accession number: 1242
Subclass: 4.1.1 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 51734 (>50 %) 51734 (>75 %) 51735 (>50 %) 51735 (>75 %) 51751 (>75 %) 51751 (>75 %) |
Number of loops: 40 Average sequence ID (%) : 16.1 +/- 16.8 Average RMSD (Å) : 0.548 +/- 0.230 Consensus geometry
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Consensus Sequence: | XhchppXX |
(φψ)-conformation: | bbpaapaa |
Pattern: | [afgilptv] | x | x | [acgiklmtv] | [cdnqrst] | [afilmpvy] | [adegnqrst] | [deknrst] | x | [adegknqst] | x | [ailmvw] | [adeknqrst] |
Conservation: | -0.606 | -0.381 | -0.752 | -0.722 | 2.275 | 0.856 | -0.315 | 1.678 | -0.704 | -0.450 | -0.875 | 0.235 | -0.241 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1azs_C_359 | 1azs | C | 361 | 373 | PHFTCAVDTENIR | EEE--TT-HHHHH | wbxbbaaxaaaaa |
1bdb_*_53 | 1bdb | - | 55 | 67 | GIVGDVRSLEDQK | EEE--TT-HHHHH | bbxbbaaxaaaaa |
1byk_A_64 | 1byk | A | 67 | 79 | IIVTRLDSLSENL | EEES-TT-HHHHH | bbxabaaxaaaaa |
1cip_A_319 | 1cip | A | 321 | 333 | THFTCATDTKNVQ | EEE--TT-HHHHH | xbxbbaaxaaaaa |
1cyd_A_55 | 1cyd | A | 56 | 68 | PVCVDLGDWDATE | EEE--TT-HHHHH | wbbbxaaxaaaaa |
1drk_*_3 | 1drk | - | 6 | 18 | LVVSTLNNPFFVS | EEES-SSSHHHHH | bbbabaabaaaaa |
1ej0_A_93 | 1ej0 | A | 95 | 107 | FLQGDFRDELVMK | EEES-TTSHHHHH | bbxbxaaxaaaaa |
1ek6_A_61 | 1ek6 | A | 62 | 74 | FEEMDILDQGALQ | EEE--TT-HHHHH | bbxbbaaxaaaaa |
1eny_*_60 | 1eny | - | 60 | 72 | LLELDVQNEEHLA | EEE--TT-HHHHH | bbxbxaabaaaaa |
1ff9_A_49 | 1ff9 | A | 51 | 63 | PISLDVNDDAALD | EEE--TT-HHHHH | wbbbxaaxaaaaa |
1fjh_A_38 | 1fjh | A | 38 | 49 | .VIADLSTAEGRK | .EE--TTSHHHHH | .bxbbaabaaaaa |
1fmc_A_62 | 1fmc | A | 64 | 76 | ACRCDITSEQELS | EEE--TT-HHHHH | bbxbbaabaaaaa |
1gc0_A_131 | 1gc0 | A | 132 | 144 | LRHVDMADLQALE | EEEE-TT-HHHHH | bbxbxaabaaaaa |
1geg_A_53 | 1geg | A | 55 | 67 | AVKVDVSDRDQVF | EEE--TTSHHHHH | xbxbbaabaaaaa |
1gud_A_3 | 1gud | A | 6 | 18 | VVLKTLSNPFWVD | EEES-SSSHHHHH | bbbabaabaaaaa |
1gy8_A_70 | 1gy8 | A | 71 | 83 | LEVGDVRNEDFLN | EEES-TT-HHHHH | bbxexaaxaaaaa |
1h5q_A_63 | 1h5q | A | 65 | 77 | AYQCDVSNTDIVT | EEE--TT-HHHHH | xbxbxaaxaaaaa |
1hdc_A_54 | 1hdc | A | 56 | 68 | YQHLDVTIEEDWQ | EEE--TT-HHHHH | bbxbbaabaaaaa |
1itw_A_484 | 1itw | A | 485 | 497 | VFWLDPARAHDAQ | EEE--TTSHHHHH | bxxbxaaxaaaaa |
1iy8_A_66 | 1iy8 | A | 68 | 80 | TTVADVSDEAQVE | EEE--TTSHHHHH | bbxbxaabaaaaa |
1izc_A_97 | 1izc | A | 99 | 111 | IVRVPKHDEVSLS | EEE--TT-HHHHH | bbxbxaaxaaaaa |
1ja9_A_81 | 1ja9 | A | 83 | 95 | AIQADISKPSEVV | EEE--TTSHHHHH | xbxbxaabaaaaa |
1jtv_A_59 | 1jtv | A | 61 | 73 | TLQLDVRDSKSVA | EEE--TT-HHHHH | bbxbbaabaaaaa |
1k2w_A_53 | 1k2w | A | 55 | 67 | AIALDVTDQASID | EEE--TT-HHHHH | xbxbbaabaaaaa |
1kjq_A_55 | 1kjq | A | 56 | 68 | SHVINMLDGDALR | EEE--TT-HHHHH | bbbbxaaxaaaaa |
1lrz_A_77 | 1lrz | A | 77 | 87 | ..VIDYENQELVH | ..EE-TT-HHHHH | ..bbxaaxaaaaa |
1n5d_A_57 | 1n5d | A | 58 | 70 | FHQLDIIDLQSIR | EEE--TT-HHHHH | bbxbbaaxaaaaa |
1nxq_A_56 | 1nxq | A | 58 | 70 | FFQHDSSDEDGWT | EEE--TT-HHHHH | bbxbbaaxaaaaa |
1oaa_*_63 | 1oaa | - | 66 | 78 | LAAADLGTEAGVQ | EEE--TTSHHHHH | bbxbxaabaaaaa |
1orr_A_53 | 1orr | A | 54 | 66 | FVHGDIRNKNDVT | EEE--TT-HHHHH | bbxbbaaxaaaaa |
1q7c_A_53 | 1q7c | A | 55 | 67 | GLMLNVTDPASIE | EEE--TT-HHHHH | bbxbbaabaaaaa |
1qsg_A_60 | 1qsg | A | 60 | 72 | VLQCDVAEDASID | EEE--TT-HHHHH | bbxbbaabaaaaa |
1qyc_A_59 | 1qyc | A | 60 | 72 | IVHGSIDDHASLV | EE---TT-HHHHH | xbxbbaabaaaaa |
1r6d_A_57 | 1r6d | A | 59 | 71 | FVHGDIRDAGLLA | EEE--TT-HHHHH | xbxbbaaxaaaaa |
1rjd_A_169 | 1rjd | A | 171 | 183 | LAACDLNDITETT | EEE--TT-HHHHH | bbxbxaabaaaaa |
1rkx_A_60 | 1rkx | A | 61 | 73 | SEIGDIRDQNKLL | EEE--TT-HHHHH | bbxbxaaxaaaaa |
1spx_A_60 | 1spx | A | 62 | 74 | SVVADVTTDAGQD | EEE--TTSHHHHH | xbxbxaabaaaaa |
1uay_A_42 | 1uay | A | 43 | 55 | YVEGDVTREEDVR | EEE--TT-HHHHH | bbxbbaabaaaaa |
2ae1_*_60 | 2ae1 | - | 62 | 74 | ASVCDLSSRSERQ | EEE--TT-HHHHH | bbxbbaaxaaaaa |
8abp_*_3 | 8abp | - | 7 | 19 | FLVKQPEEPWFQT | EEES-TTSHHHHH | bbbabaaxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gud_A_3 | 1gud | A | ZN3ZN BINDING SITE FOR CHAIN A | E - 3 |
1gy8_A_70 | 1gy8 | A | AC1NAD BINDING SITE FOR CHAIN A | G - 74 |
1gy8_A_70 | 1gy8 | A | AC1NAD BINDING SITE FOR CHAIN A | D - 75 |
1h5q_A_63 | 1h5q | A | AC1NAP BINDING SITE FOR CHAIN A | C - 68 |
1h5q_A_63 | 1h5q | A | AC1NAP BINDING SITE FOR CHAIN A | D - 69 |
Clusters included in this Subclass |
CLUSTER: EH.4.37 |
CLUSTER: EH.4.8 |
CLUSTER: EH.5.147 |
CLUSTER: EH.5.5 |
CLUSTER: EH.6.180 |
CLUSTER: EH.6.2 |
CLUSTER: EH.6.52 |