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PDB code:

Information on SUBCLASS 4.13.1

Subclass Accession number: 1271 Subclass: 4.13.1 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates:

Number of loops: 9 Average sequence ID (%) : 9.6 +/- 14.4 Average RMSD (Å) : 0.900 +/- 0.224 Consensus geometry d (Å): 15 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1b65_A_355	1b65	A	355	365	LVQAIDHERLR	EE----HHHHH	bbxxpxaaaaa
1bg2_*_8	1bg2	-	14	24	RFRPLNESEVN	EE----HHHHH	bxbxxxaaaaa
1em9_A_9	1em9	A	10	20	AWTPLEPKLIT	EE----HHHHH	bxbxxpaaaaa
1gpm_A_482	1gpm	A	484	494	HWAHLPYDFLG	EE----HHHHH	bxxxxpaaaaa
1qgw_A_38	1qgw	A	45	55	TKVTVSESDAA	EE----HHHHH	bxxbbxaaaaa
1rif_A_110	1rif	A	110	120	KRIEPHWYQKD	EE----HHHHH	xxbbxxaaaaa
1ry6_A_2	1ry6	A	7	17	RKRPLSELEKK	EE----HHHHH	bxxxpxaaaaa
1st0_A_78	1st0	A	85	95	EKTPFQVEQVA	EE----HHHHH	bxxwxbaaaaa
1us5_A_204	1us5	A	205	215	ALVAVDLNRIQ	EE----HHHHH	bbxxbxaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1bg2_*_8	1bg2	*	ADPADENOSINE-5'-DIPHOSPHATE	R - 14
1bg2_*_8	1bg2	*	ADPADENOSINE-5'-DIPHOSPHATE	F - 15
1bg2_*_8	1bg2	*	ADPADENOSINE-5'-DIPHOSPHATE	R - 16
1bg2_*_8	1bg2	*	ADPADENOSINE-5'-DIPHOSPHATE	P - 17
1bg2_*_8	1bg2	*	ADPADENOSINE-5'-DIPHOSPHATE	N - 19
1qgw_A_38	1qgw	A	DBV15,16-DIHYDROBILIVERDIN	M - 38
1qgw_A_38	1qgw	A	PEBPHYCOERYTHROBILIN	M - 38
1qgw_A_38	1qgw	A	DBV15,16-DIHYDROBILIVERDIN	M - 39
1qgw_A_38	1qgw	A	PEBPHYCOERYTHROBILIN	M - 39
1qgw_A_38	1qgw	A	PEBPHYCOERYTHROBILIN	V - 40
1qgw_A_38	1qgw	A	DBV15,16-DIHYDROBILIVERDIN	K - 41
1st0_A_78	1st0	A	GTG7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE	I - 83
1st0_A_78	1st0	A	GTG7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE	E - 85
1st0_A_78	1st0	A	YT3YTTRIUM (III) ION	E - 92

Clusters included in this Subclass

CLUSTER: EH.4.79

CLUSTER: EH.5.100

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