Logo
Information on SUBCLASS 5.1.6
Subclass Accession number: 3197
Subclass: 5.1.6 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 20.7 +/- 24.4
Average RMSD (Å) : 0.587 +/- 0.196

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hXXpXXXXp
(φψ)-conformation: bbpaappaa
Pattern: [FIV][aknt][mwy][acltv][KNPR][de]x[ADS][HKPST]x[DEKR]xx[aimv]x
Conservation:1.870-0.8061.049-0.7170.2601.086-1.1221.074-0.302-0.6181.027-0.913-0.5470.046-1.385
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cfy_A_791cfy   A86100FTWSPDTAPVRSKMVEEE--TTS-HHHHHHbbbbxaaxwaaaaaa
1cnu_A_741cnu   A8296ILWAPDSAPIKSKMMEEE--TTS-HHHHHHbbxbwaaxxaaaaaa
1f7s_A_811f7s   A88102IAWCPDIAKVRSKMIEEE--TTS-HHHHHHbbxbxaapxaaaaaa
1gjo_A_5111gjo   A516530VKMLKDDATEKDLSDEEE--TT--HHHHHHbxbxxaapbaaaaaa
1luf_A_6021luf   A607621VKMLKEEASADMQADEEE--TT--HHHHHHxbbxpaaxxaaaaaa
1m4j_A_801m4j   A86100IAWSPDHSHVRQKMLEEE--TTS-HHHHHHbbbbpaaxxaaaaaa
1mdb_A_3371mdb   A337351VNYTRLDDPEEIIVNEEE--TTS-HHHHHHbbbxxaaxxaaaaaa
1p4o_A_9951p4o   A10021016IKTVNEAASMRERIEEEE--TTS-HHHHHHbxbbpaaxxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f7s_A_811f7s   A     LDALAURYL DIMETHYLAMINE-N-OXIDE F - 86
1f7s_A_811f7s   A     LDALAURYL DIMETHYLAMINE-N-OXIDE I - 88
1f7s_A_811f7s   A     LDALAURYL DIMETHYLAMINE-N-OXIDE W - 90
1f7s_A_811f7s   A     LDALAURYL DIMETHYLAMINE-N-OXIDE P - 92
1mdb_A_3371mdb   A     DBH2,3-DIHYDROXY-BENZOIC ACID V - 337
1mdb_A_3371mdb   A     DBH2,3-DIHYDROXY-BENZOIC ACID Y - 339

Clusters included in this Subclass
CLUSTER: EH.5.171
CLUSTER: EH.7.115
CLUSTER: EH.7.71