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Information on SUBCLASS 5.16.3
Subclass Accession number: 1406
Subclass: 5.16.3 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 6.2 +/- 6.8
Average RMSD (Å) : 1.133 +/- 0.208

Consensus geometry
d (Å): 17 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XpXhXXXXh
(φψ)-conformation: bbpbpppaa
Pattern: x[MTV][NQT][AQT][ILM][DP]x[DP]x[AGV][CSV][HRT]x[APQ]x[RS]
Conservation:-1.3650.1290.129-0.4151.3511.887-0.8221.887-0.279-0.686-0.550-0.143-0.686-0.415-0.9580.935
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a1v_A_4451a1v   A447462ETTTLPQDAVSRTQRREEE----BHHHHHHHHbbbxbxxbaaaaaaaa
1bou_B_1181bou   B119134IMNQMDVDHGCTVPLSEESS--B-HHHHHHHHxbabbxbxaaaaaaaa
1o9p_A_2561o9p   A256271SVQAIDLPEAVHEAWREEEE----HHHHHHHHbbbxbxxwaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a1v_A_4451a1v   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE T - 449
1a1v_A_4451a1v   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE T - 450
1a1v_A_4451a1v   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE L - 451
1a1v_A_4451a1v   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE P - 452
1a1v_A_4451a1v   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE Q - 453
1a1v_A_4451a1v   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE D - 454
1a1v_A_4451a1v   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE S - 457
1a1v_A_4451a1v   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE R - 461
1bou_B_1181bou   B     FEFE (III) ION H - 127
1bou_B_1181bou   B     FEFE (III) ION G - 128
1o9p_A_2561o9p   A     MLAMALONIC ACID H - 273
1o9p_A_2561o9p   A     MLAMALONIC ACID Q - 277
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o9p_A_2561o9p   A AC1MLA BINDING SITE FOR CHAIN AQ - 277

Clusters included in this Subclass
CLUSTER: EH.5.280