Information on SUBCLASS 5.16.3 |
Subclass Accession number: 1406
Subclass: 5.16.3 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 6.2 +/- 6.8 Average RMSD (Å) : 1.133 +/- 0.208 Consensus geometry
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Consensus Sequence: | XpXhXXXXh |
(φψ)-conformation: | bbpbpppaa |
Pattern: | x | [MTV] | [NQT] | [AQT] | [ILM] | [DP] | x | [DP] | x | [AGV] | [CSV] | [HRT] | x | [APQ] | x | [RS] |
Conservation: | -1.365 | 0.129 | 0.129 | -0.415 | 1.351 | 1.887 | -0.822 | 1.887 | -0.279 | -0.686 | -0.550 | -0.143 | -0.686 | -0.415 | -0.958 | 0.935 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a1v_A_445 | 1a1v | A | 447 | 462 | ETTTLPQDAVSRTQRR | EEE----BHHHHHHHH | bbbxbxxbaaaaaaaa |
1bou_B_118 | 1bou | B | 119 | 134 | IMNQMDVDHGCTVPLS | EESS--B-HHHHHHHH | xbabbxbxaaaaaaaa |
1o9p_A_256 | 1o9p | A | 256 | 271 | SVQAIDLPEAVHEAWR | EEEE----HHHHHHHH | bbbxbxxwaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a1v_A_445 | 1a1v | A | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | T - 449 |
1a1v_A_445 | 1a1v | A | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | T - 450 |
1a1v_A_445 | 1a1v | A | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | L - 451 |
1a1v_A_445 | 1a1v | A | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | P - 452 |
1a1v_A_445 | 1a1v | A | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | Q - 453 |
1a1v_A_445 | 1a1v | A | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | D - 454 |
1a1v_A_445 | 1a1v | A | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | S - 457 |
1a1v_A_445 | 1a1v | A | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | R - 461 |
1bou_B_118 | 1bou | B | FEFE (III) ION | H - 127 |
1bou_B_118 | 1bou | B | FEFE (III) ION | G - 128 |
1o9p_A_256 | 1o9p | A | MLAMALONIC ACID | H - 273 |
1o9p_A_256 | 1o9p | A | MLAMALONIC ACID | Q - 277 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1o9p_A_256 | 1o9p | A | AC1MLA BINDING SITE FOR CHAIN A | Q - 277 |
Clusters included in this Subclass |
CLUSTER: EH.5.280 |