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Information on SUBCLASS 5.20.1
Subclass Accession number: 1413
Subclass: 5.20.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.1 (>75 %)  1.1.1 (>75 %)  
GO : GO:0016614 (>75 %)  GO:0016616 (>75 %)  
SCOP : 51734 (>75 %)  51735 (>75 %)  51751 (>75 %)  
Number of loops: 7

Average sequence ID (%) : 8.7 +/- 12.3
Average RMSD (Å) : 0.900 +/- 0.327

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXXpXXXXX
(φψ)-conformation: bbaaapbaa
Pattern: [iltv][AIKTV][aknst]x[EGKQS]xx[AGKNT][ekpt][degr][dehqt][filmtv]
Conservation:1.6520.763-1.141-0.8501.869-0.454-0.5490.618-0.789-0.710-0.014-0.395
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jp4_A_1911jp4   A193204TTTRSHSNKLVTEEESSS--HHHHbbpaaaxbaaaa
1k4i_A_401k4i   A4354IIAAESVTTEQMEEEGGG--HHHHbbxaaaxxaaaa
1n2z_A_811n2z   A8394IAWRGGNAERQVEE-TTTS-HHHHxbbaaabxaaaa
1nvm_B_1501nvm   B158169SISSKSAGPGTREEEGGGS-HHHHbbxaaaxxaaaa
1oa8_A_5881oa8   A588599LKKVEDLKTEDFEEEGGG--HHHHbbxaaapbaaaa
1pvy_A_291pvy   A3243VVASQFITPEHIEEEGGG--HHHHbbxaaaxbaaaa
5nul_*_315nul   -3243TINVSDVNIDELEEEGGG--HHHHbbxaaaxbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jp4_A_1911jp4   A     AMPADENOSINE MONOPHOSPHATE T - 194
1jp4_A_1911jp4   A     AMPADENOSINE MONOPHOSPHATE T - 195
1jp4_A_1911jp4   A     AMPADENOSINE MONOPHOSPHATE R - 196
1jp4_A_1911jp4   A     AMPADENOSINE MONOPHOSPHATE S - 197
1jp4_A_1911jp4   A     PO4PHOSPHATE ION H - 198
1jp4_A_1911jp4   A     AMPADENOSINE MONOPHOSPHATE H - 198
1k4i_A_401k4i   A     SULSULFATE ANION D - 41
1k4i_A_401k4i   A     MGMAGNESIUM ION D - 41
1n2z_A_811n2z   A     CNCCO-CYANOCOBALAMIN W - 85
1n2z_A_811n2z   A     CDCADMIUM ION R - 86
1n2z_A_811n2z   A     CDCADMIUM ION G - 87
1n2z_A_811n2z   A     CNCCO-CYANOCOBALAMIN G - 87
1n2z_A_811n2z   A     CNCCO-CYANOCOBALAMIN G - 88
1n2z_A_811n2z   A     CDCADMIUM ION N - 89
1n2z_A_811n2z   A     CNCCO-CYANOCOBALAMIN N - 89
1n2z_A_811n2z   A     CDCADMIUM ION A - 90
1n2z_A_811n2z   A     CDCADMIUM ION E - 91
1n2z_A_811n2z   A     CDCADMIUM ION R - 92
1nvm_B_1501nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 159
1nvm_B_1501nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 163
1nvm_B_1501nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 164
1nvm_B_1501nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 165
1nvm_B_1501nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE P - 166
1nvm_B_1501nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 167
1nvm_B_1501nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 168
1nvm_B_1501nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 169
1pvy_A_291pvy   A     R5PRIBOSE-5-PHOSPHATE D - 30
1pvy_A_291pvy   A     ZNZINC ION D - 30
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oa8_A_5881oa8   A AC1NA BINDING SITE FOR CHAIN AA - 603

Clusters included in this Subclass
CLUSTER: EH.5.61