Information on SUBCLASS 5.5.6 |
Subclass Accession number: 1385
Subclass: 5.5.6 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 9.1 +/- 10.2 Average RMSD (Å) : 1.300 +/- 0.265 Consensus geometry
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Consensus Sequence: | XhpXGXphX |
(φψ)-conformation: | bbppgppaa |
Pattern: | [GLP] | [GLV] | x | [AGL] | [DKT] | [AET] | [G] | x | [HT] | [AGP] | [GIT] | [EMQ] | [AFI] | [ANV] | [AKL] | [KR] | x | x | x | [AEM] | [AEL] | x |
Conservation: | -0.955 | -0.709 | 0.499 | -0.545 | -0.054 | -0.054 | 3.550 | -0.217 | 0.746 | 0.028 | -0.791 | 0.356 | -0.217 | -0.545 | -0.463 | 1.823 | -0.545 | -0.381 | -0.054 | -0.381 | -0.627 | -0.463 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1el6_A_112 | 1el6 | A | 113 | 134 | PVSATTGMTAIEFVAKVRVALQ | EEEEETT-BHHHHHHHHHHHHH | wbxbbpgxxaaaaaaaaaaaaa |
1nqz_A_70 | 1nqz | A | 70 | 91 | GGSLDAGETPTQAALREAQEEV | EEE--TT--HHHHHHHHHHHHH | eexxxxvbxaaaaaaaaaaaaa |
1pne_*_108 | 1pne | - | 111 | 132 | LLMGKEGVHGGMINKKCYEMAS | EEEE-TT--HHHHHHHHHHHHH | bbbxxxvxpaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1nqz_A_70 | 1nqz | A | MGMAGNESIUM ION | G - 70 |
1nqz_A_70 | 1nqz | A | MGMAGNESIUM ION | G - 71 |
1nqz_A_70 | 1nqz | A | MGMAGNESIUM ION | S - 72 |
1nqz_A_70 | 1nqz | A | MGMAGNESIUM ION | R - 85 |
1nqz_A_70 | 1nqz | A | MGMAGNESIUM ION | E - 86 |
1nqz_A_70 | 1nqz | A | MGMAGNESIUM ION | E - 89 |
1nqz_A_70 | 1nqz | A | MGMAGNESIUM ION | E - 90 |
Clusters included in this Subclass |
CLUSTER: EH.5.211 |