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Information on SUBCLASS 5.5.6
Subclass Accession number: 1385
Subclass: 5.5.6 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 9.1 +/- 10.2
Average RMSD (Å) : 1.300 +/- 0.265

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XhpXGXphX
(φψ)-conformation: bbppgppaa
Pattern: [GLP][GLV]x[AGL][DKT][AET][G]x[HT][AGP][GIT][EMQ][AFI][ANV][AKL][KR]xxx[AEM][AEL]x
Conservation:-0.955-0.7090.499-0.545-0.054-0.0543.550-0.2170.7460.028-0.7910.356-0.217-0.545-0.4631.823-0.545-0.381-0.054-0.381-0.627-0.463
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1el6_A_1121el6   A113134PVSATTGMTAIEFVAKVRVALQEEEEETT-BHHHHHHHHHHHHHwbxbbpgxxaaaaaaaaaaaaa
1nqz_A_701nqz   A7091GGSLDAGETPTQAALREAQEEVEEE--TT--HHHHHHHHHHHHHeexxxxvbxaaaaaaaaaaaaa
1pne_*_1081pne   -111132LLMGKEGVHGGMINKKCYEMASEEEE-TT--HHHHHHHHHHHHHbbbxxxvxpaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1nqz_A_701nqz   A     MGMAGNESIUM ION G - 70
1nqz_A_701nqz   A     MGMAGNESIUM ION G - 71
1nqz_A_701nqz   A     MGMAGNESIUM ION S - 72
1nqz_A_701nqz   A     MGMAGNESIUM ION R - 85
1nqz_A_701nqz   A     MGMAGNESIUM ION E - 86
1nqz_A_701nqz   A     MGMAGNESIUM ION E - 89
1nqz_A_701nqz   A     MGMAGNESIUM ION E - 90

Clusters included in this Subclass
CLUSTER: EH.5.211