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Information on SUBCLASS 5.50.1
Subclass Accession number: 1445
Subclass: 5.50.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  2.4 (>75 %)  2.4.2 (>75 %)  2.4.2.96 (>75 %)  
GO : GO:0000287 (>50 %)  GO:0004845 (>50 %)  GO:0016757 (>50 %)  GO:0016763 (>50 %)  GO:0016874 (>75 %)  
SCOP : 53270 (>75 %)  53271 (>75 %)  53272 (>75 %)  56800 (>75 %)  56801 (>75 %)  56802 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 14.3 +/- 14.3
Average RMSD (Å) : 1.167 +/- 0.586

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: hXhXNhXXX
(φψ)-conformation: bbpplppaa
Pattern: x[ILV]x[AGL][EW][N][VWY]xx[ANS]x[AL][EK][HKR]
Conservation:-0.5000.584-0.428-0.8610.2152.7520.151-1.078-0.933-0.138-0.933-0.0360.9120.295
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8i_*_6401a8i   -642655VIFLENYRVSLAEKEEEETT--HHHHHHbbxxxvxbaaaaaa
1bag_*_111bag   -1124ILHAWNWSFNTLKHEEE-TTB-HHHHHHbxxxxvxxaaaaaa
1ezv_B_1851ezv   B186199EVSGENVVEADLKREEB-BTB-HHHHHHbxbbxvbxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a8i_*_6401a8i   *     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) Y - 648
1a8i_*_6401a8i   *     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) R - 649
1a8i_*_6401a8i   *     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) V - 650
1a8i_*_6401a8i   *     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) A - 653

Clusters included in this Subclass
CLUSTER: EH.5.223