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Information on SUBCLASS 5.6.1
Subclass Accession number: 1386
Subclass: 5.6.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.1 (>50 %)  2.1.1 (>50 %)  
GO : GO:0005524 (>75 %)  GO:0008168 (>75 %)  GO:0008171 (>75 %)  GO:0008757 (>75 %)  GO:0016741 (>75 %)  GO:0016772 (>75 %)  GO:0030554 (>75 %)  
SCOP : 52539 (>75 %)  52540 (>75 %)  53334 (>75 %)  53335 (>75 %)  
Number of loops: 10

Average sequence ID (%) : 34.2 +/- 23.8
Average RMSD (Å) : 0.530 +/- 0.142

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: phGXGXGXX
(φψ)-conformation: bblaeagaa
Pattern: [AFILV][LV][DES][ILV][G][ACGST][GY][acstv][G]xx[adgstv][aiklmv]x[AFILMV]
Conservation:-0.1270.3800.5840.3681.986-0.5100.759-0.6481.986-1.059-0.772-0.861-0.779-1.041-0.266
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dl5_A_781dl5   A7993VLEIGGGTGYNAAVMEEEE--TTSHHHHHHbbxbvaeagaaaaaa
1dus_A_581dus   A5973ILDLGCGYGVIGIALEEEET-TTSHHHHHHbbbxvaeagaaaaaa
1f3l_A_2551f3l   A256270VLDVGCGTGILSMFAEEEET-TTSHHHHHHbbbxvaeavaaaaaa
1fp1_D_2121fp1   D213227LVDVGGGSGRNLELIEEEET-TTSHHHHHHbbxxvaeavaaaaaa
1fp2_A_1911fp2   A192206IVDVGGGTGTTAKIIEEEET-TTSHHHHHHbbxxvaeavaaaaaa
1h1d_A_611h1d   A6276VLELGAYCGYSAVRMEEEE--TTSHHHHHHbbbbSaeavaaaaaa
1i1n_A_801i1n   A8195ALDVGSGSGILTACFEEEET-TTSHHHHHHbbbxvaeavaaaaaa
1jg1_A_951jg1   A95109ILEVGTGSGWNAALIEEEE--TTSHHHHHHbbbbvaeavaaaaaa
1jqe_A_531jqe   A5670ILSIGGGAGEIDLQIEEEET-TTSHHHHHHbbbxvaeavaaaaaa
1nw3_A_1581nw3   A159173FVDLGSGVGQVVLQVEEEET-TTSHHHHHHbbbxvaeavaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dl5_A_781dl5   A     SAHS-ADENOSYL-L-HOMOCYSTEINE E - 81
1dl5_A_781dl5   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 82
1dl5_A_781dl5   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 83
1dl5_A_781dl5   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 84
1dl5_A_781dl5   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 85
1dl5_A_781dl5   A     SAHS-ADENOSYL-L-HOMOCYSTEINE T - 86
1dl5_A_781dl5   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 87
1dl5_A_781dl5   A     SAHS-ADENOSYL-L-HOMOCYSTEINE Y - 88
1dl5_A_781dl5   A     SAHS-ADENOSYL-L-HOMOCYSTEINE N - 89
1dl5_A_781dl5   A     SAHS-ADENOSYL-L-HOMOCYSTEINE A - 90
1dus_A_581dus   A     MSESELENOMETHIONINE I - 59
1dus_A_581dus   A     MSESELENOMETHIONINE L - 60
1dus_A_581dus   A     MSESELENOMETHIONINE D - 61
1dus_A_581dus   A     MSESELENOMETHIONINE L - 62
1dus_A_581dus   A     MSESELENOMETHIONINE C - 64
1dus_A_581dus   A     MSESELENOMETHIONINE Y - 66
1dus_A_581dus   A     MSESELENOMETHIONINE G - 67
1dus_A_581dus   A     MSESELENOMETHIONINE V - 68
1dus_A_581dus   A     MSESELENOMETHIONINE I - 69
1dus_A_581dus   A     MSESELENOMETHIONINE G - 70
1dus_A_581dus   A     MSESELENOMETHIONINE I - 71
1f3l_A_2551f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE D - 258
1f3l_A_2551f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 259
1f3l_A_2551f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 260
1f3l_A_2551f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE C - 261
1f3l_A_2551f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 262
1f3l_A_2551f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE T - 263
1f3l_A_2551f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 264
1f3l_A_2551f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 265
1f3l_A_2551f3l   A     SAHS-ADENOSYL-L-HOMOCYSTEINE L - 266
1fp1_D_2121fp1   D     SAHS-ADENOSYL-L-HOMOCYSTEINE D - 215
1fp1_D_2121fp1   D     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 216
1fp1_D_2121fp1   D     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 217
1fp1_D_2121fp1   D     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 218
1fp1_D_2121fp1   D     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 219
1fp1_D_2121fp1   D     SAHS-ADENOSYL-L-HOMOCYSTEINE S - 220
1fp1_D_2121fp1   D     SAHS-ADENOSYL-L-HOMOCYSTEINE N - 223
1fp1_D_2121fp1   D     HCC2',4,4'-TRIHYDROXYCHALCONE N - 223
1fp2_A_1911fp2   A     SAHS-ADENOSYL-L-HOMOCYSTEINE D - 194
1fp2_A_1911fp2   A     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 195
1fp2_A_1911fp2   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 196
1fp2_A_1911fp2   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 197
1fp2_A_1911fp2   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 198
1fp2_A_1911fp2   A     SAHS-ADENOSYL-L-HOMOCYSTEINE T - 202
1h1d_A_611h1d   A     SAMS-ADENOSYLMETHIONINE E - 64
1h1d_A_611h1d   A     SAMS-ADENOSYLMETHIONINE L - 65
1h1d_A_611h1d   A     SAMS-ADENOSYLMETHIONINE G - 66
1h1d_A_611h1d   A     SAMS-ADENOSYLMETHIONINE A - 67
1h1d_A_611h1d   A     SAMS-ADENOSYLMETHIONINE Y - 68
1h1d_A_611h1d   A     SAMS-ADENOSYLMETHIONINE C - 69
1h1d_A_611h1d   A     SAMS-ADENOSYLMETHIONINE G - 70
1h1d_A_611h1d   A     SAMS-ADENOSYLMETHIONINE Y - 71
1h1d_A_611h1d   A     SAMS-ADENOSYLMETHIONINE S - 72
1h1d_A_611h1d   A     SAMS-ADENOSYLMETHIONINE A - 73
1i1n_A_801i1n   A     SAHS-ADENOSYL-L-HOMOCYSTEINE D - 83
1i1n_A_801i1n   A     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 84
1i1n_A_801i1n   A     SAHS-ADENOSYL-L-HOMOCYSTEINE S - 86
1i1n_A_801i1n   A     SAHS-ADENOSYL-L-HOMOCYSTEINE S - 88
1i1n_A_801i1n   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 89
1i1n_A_801i1n   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 90
1i1n_A_801i1n   A     SAHS-ADENOSYL-L-HOMOCYSTEINE L - 91
1jg1_A_951jg1   A     SAHS-ADENOSYL-L-HOMOCYSTEINE E - 97
1jg1_A_951jg1   A     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 98
1jg1_A_951jg1   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 99
1jg1_A_951jg1   A     SAHS-ADENOSYL-L-HOMOCYSTEINE T - 100
1jg1_A_951jg1   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 101
1jg1_A_951jg1   A     SAHS-ADENOSYL-L-HOMOCYSTEINE S - 102
1jg1_A_951jg1   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 103
1jg1_A_951jg1   A     SAHS-ADENOSYL-L-HOMOCYSTEINE W - 104
1jg1_A_951jg1   A     SAHS-ADENOSYL-L-HOMOCYSTEINE N - 105
1jg1_A_951jg1   A     SAHS-ADENOSYL-L-HOMOCYSTEINE A - 106
1jqe_A_531jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 59
1jqe_A_531jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 60
1jqe_A_531jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 61
1jqe_A_531jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 62
1jqe_A_531jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE A - 63
1jqe_A_531jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 64
1jqe_A_531jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE E - 65
1jqe_A_531jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 66
1jqe_A_531jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE D - 67
1nw3_A_1581nw3   A     ACTACETATE ION L - 158
1nw3_A_1581nw3   A     ACTACETATE ION F - 159
1nw3_A_1581nw3   A     ACTACETATE ION V - 160
1nw3_A_1581nw3   A     SAMS-ADENOSYLMETHIONINE D - 161
1nw3_A_1581nw3   A     SAMS-ADENOSYLMETHIONINE L - 162
1nw3_A_1581nw3   A     SAMS-ADENOSYLMETHIONINE G - 163
1nw3_A_1581nw3   A     SAMS-ADENOSYLMETHIONINE S - 164
1nw3_A_1581nw3   A     SAMS-ADENOSYLMETHIONINE G - 165
1nw3_A_1581nw3   A     SAMS-ADENOSYLMETHIONINE V - 166
1nw3_A_1581nw3   A     SAMS-ADENOSYLMETHIONINE Q - 168
1nw3_A_1581nw3   A     SAMS-ADENOSYLMETHIONINE V - 169

Clusters included in this Subclass
CLUSTER: EH.4.57