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Information on SUBCLASS 8.20.1
Subclass Accession number: 3497
Subclass: 8.20.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  1 (>75 %)  3 (>75 %)  4.1 (>75 %)  4.1.2 (>75 %)  4.1.2.45 (>75 %)  
GO : GO:0003677 (>75 %)  GO:0004139 (>75 %)  GO:0004407 (>75 %)  GO:0008270 (>50 %)  GO:0016810 (>75 %)  GO:0016811 (>75 %)  GO:0016830 (>75 %)  GO:0016832 (>75 %)  GO:0017136 (>75 %)  GO:0019213 (>75 %)  GO:0046914 (>50 %)  
SCOP : 51569 (>75 %)  51570 (>75 %)  52466 (>75 %)  52467 (>75 %)  63984 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 55.0 +/- -0.7
Average RMSD (Å) : 0.267 +/- 0.058

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: VhGpShhVpPhA
(φψ)-conformation: bblbalabbwaa
Pattern: [ALV][FIV][IM][V][AV][G][ST][S][AL][AV][V][QY][P][AF][A][ES][L][P]xx
Conservation:-0.946-0.593-0.2130.466-0.5551.525-0.1130.466-0.811-0.5550.466-0.1622.054-0.8920.466-0.4680.4662.054-1.417-1.234
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1m2k_A_1801m2k   A180199VIIVAGTSAVVQPAASLPLIEEEEES--S-STTGGGHHHHbbxbbvbalaxbwaaaaaaa
1ma3_A_1861ma3   A186205AFMVVGSSLVVYPAAELPYIEEEEES--S-STTGGGHHHHbbbxbvbalabbwaaaaaaa
1q1a_A_2181q1a   A218237LVIVVGTSLAVYPFASLPEEEEEEES----STTTTHHHHHbbbbblbalabbwaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1m2k_A_1801m2k   A     APRADENOSINE-5-DIPHOSPHORIBOSE A - 184
1m2k_A_1801m2k   A     APRADENOSINE-5-DIPHOSPHORIBOSE G - 185
1m2k_A_1801m2k   A     APRADENOSINE-5-DIPHOSPHORIBOSE T - 186
1m2k_A_1801m2k   A     APRADENOSINE-5-DIPHOSPHORIBOSE S - 187
1m2k_A_1801m2k   A     APRADENOSINE-5-DIPHOSPHORIBOSE A - 188
1m2k_A_1801m2k   A     APRADENOSINE-5-DIPHOSPHORIBOSE V - 189
1m2k_A_1801m2k   A     APRADENOSINE-5-DIPHOSPHORIBOSE V - 190
1ma3_A_1861ma3   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID V - 195
1ma3_A_1861ma3   A     ALYN(6)-ACETYLLYSINE V - 196
1ma3_A_1861ma3   A     ALYN(6)-ACETYLLYSINE Y - 197
1ma3_A_1861ma3   A     ALYN(6)-ACETYLLYSINE P - 198
1q1a_A_2181q1a   A     OAD2'-O-ACETYL ADENOSINE-5-DIPHOSPHORIBOSE V - 222
1q1a_A_2181q1a   A     OAD2'-O-ACETYL ADENOSINE-5-DIPHOSPHORIBOSE G - 223
1q1a_A_2181q1a   A     OAD2'-O-ACETYL ADENOSINE-5-DIPHOSPHORIBOSE T - 224
1q1a_A_2181q1a   A     OAD2'-O-ACETYL ADENOSINE-5-DIPHOSPHORIBOSE S - 225
1q1a_A_2181q1a   A     OAD2'-O-ACETYL ADENOSINE-5-DIPHOSPHORIBOSE L - 226
1q1a_A_2181q1a   A     OAD2'-O-ACETYL ADENOSINE-5-DIPHOSPHORIBOSE A - 227
1q1a_A_2181q1a   A     ALYN(6)-ACETYLLYSINE V - 228
1q1a_A_2181q1a   A     OAD2'-O-ACETYL ADENOSINE-5-DIPHOSPHORIBOSE V - 228
1q1a_A_2181q1a   A     ALYN(6)-ACETYLLYSINE Y - 229
1q1a_A_2181q1a   A     ALYN(6)-ACETYLLYSINE P - 230

Clusters included in this Subclass
CLUSTER: EH.10.61