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Information on SUBCLASS 8.23.1
Subclass Accession number: 3500
Subclass: 8.23.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.18 (>75 %)  1.18.1 (>75 %)  1.18.1.2
GO : GO:0000287 (>50 %)  GO:0005489 (>50 %)  GO:0008937 (>50 %)  GO:0016730 (>50 %)  GO:0016731 (>50 %)  GO:0016829 (>50 %)  
SCOP : 52342 (>75 %)  52343 (>75 %)  52344 (>50 %)  52517 (>75 %)  52518 (>75 %)  88749 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 30.0 +/- 18.8
Average RMSD (Å) : 0.567 +/- 0.058

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: hppXhhXphGhX
(φψ)-conformation: bbpaaalppgaa
Pattern: x[IL][ST][QS][ANV][GL][CFW][AGS][ST][FIM][G][FVY][GT][IT][GP][AG][AT][IL][AG][A]
Conservation:-1.2500.5650.450-0.126-1.617-1.490-0.149-0.5160.285-0.4242.969-0.241-0.294-0.5180.1400.012-0.1260.5340.4771.318
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1pox_A_4121pox   A413432HITSNLFATMGVGIPGAIAAEE---SS--TT-HHHHHHHHbbbxaaalxxvaaaaaaaaa
1qpb_A_4051qpb   A406425GISQVLWGSIGFTTGATLGAEEE-TTT--TTHHHHHHHHHbbbxaaalbxgaaaaaaaaa
1upa_A_4291upa   A429448FLTSAGCSSFGYGIPAAIGAEE--SSS--TT-HHHHHHHHbbbxaaalxxvaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1pox_A_4121pox   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 415
1pox_A_4121pox   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 416
1pox_A_4121pox   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 417
1pox_A_4121pox   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 418
1pox_A_4121pox   A     TPPTHIAMINE DIPHOSPHATE F - 419
1pox_A_4121pox   A     TPPTHIAMINE DIPHOSPHATE A - 420
1pox_A_4121pox   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 420
1pox_A_4121pox   A     TPPTHIAMINE DIPHOSPHATE T - 421
1pox_A_4121pox   A     TPPTHIAMINE DIPHOSPHATE M - 422
1qpb_A_4051qpb   A     TPPTHIAMINE DIPHOSPHATE W - 412
1qpb_A_4051qpb   A     TPPTHIAMINE DIPHOSPHATE G - 413
1qpb_A_4051qpb   A     PYMPYRUVAMIDE G - 413
1qpb_A_4051qpb   A     TPPTHIAMINE DIPHOSPHATE S - 414
1qpb_A_4051qpb   A     TPPTHIAMINE DIPHOSPHATE I - 415
1qpb_A_4051qpb   A     PYMPYRUVAMIDE I - 415
1qpb_A_4051qpb   A     TPPTHIAMINE DIPHOSPHATE G - 416
1upa_A_4291upa   A     TPPTHIAMINE DIPHOSPHATE S - 436
1upa_A_4291upa   A     TPPTHIAMINE DIPHOSPHATE S - 437
1upa_A_4291upa   A     TPPTHIAMINE DIPHOSPHATE F - 438
1upa_A_4291upa   A     MSESELENOMETHIONINE A - 445
1upa_A_4291upa   A     MSESELENOMETHIONINE I - 446
1upa_A_4291upa   A     MSESELENOMETHIONINE G - 447
1upa_A_4291upa   A     MSESELENOMETHIONINE A - 448
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1upa_A_4291upa   A AC1TPP BINDING SITE FOR CHAIN AS - 436
1upa_A_4291upa   A AC1TPP BINDING SITE FOR CHAIN AS - 437

Clusters included in this Subclass
CLUSTER: EH.9.59