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Information on SUBCLASS 8.25.1
Subclass Accession number: 3502
Subclass: 8.25.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>50 %)  1.12 (>75 %)  1.12.2 (>50 %)  1.12.2.16.2 (>50 %)  6.2.1 (>50 %)  
GO : GO:0004774 (>50 %)  GO:0016405 (>50 %)  GO:0016874 (>50 %)  GO:0016877 (>50 %)  GO:0016878 (>50 %)  
SCOP : 56058 (>50 %)  56059 (>50 %)  56081 (>50 %)  56761 (>75 %)  56762 (>75 %)  56763 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 16.7 +/- 16.3
Average RMSD (Å) : 0.833 +/- 0.252

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXhXXXpGhXXp
(φψ)-conformation: bbppaaaeppaa
Pattern: [FHY][KL]xx[GIL][DP]x[ILT][ERT][G][IP]xx[SY]x[AGL]
Conservation:1.1590.092-0.424-0.801-0.8770.945-0.877-0.047-0.1983.044-0.226-0.349-0.5750.083-0.221-0.726
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1euc_B_1521euc   B152167FKEQIDIIEGIKDSQAEEEE-BTTTB--HHHHbbbxbxaaaexxaaaa
1mxi_A_951mxi   A96111YLMFGPETRGIPMSILEEEE--TTT-S-HHHHbbbbxxaaNexpaaaa
2scu_B_1442scu   B145160HKVALDPLTGPMPYQGEEEE--TTT---HHHHbbbbxxaaaepbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1mxi_A_951mxi   A     SAHS-ADENOSYL-L-HOMOCYSTEINE M - 98
1mxi_A_951mxi   A     SAHS-ADENOSYL-L-HOMOCYSTEINE F - 99
1mxi_A_951mxi   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 100
1mxi_A_951mxi   A     SAHS-ADENOSYL-L-HOMOCYSTEINE P - 101
1mxi_A_951mxi   A     SAHS-ADENOSYL-L-HOMOCYSTEINE E - 102
1mxi_A_951mxi   A     SAHS-ADENOSYL-L-HOMOCYSTEINE T - 103
1mxi_A_951mxi   A     SAHS-ADENOSYL-L-HOMOCYSTEINE R - 104
1mxi_A_951mxi   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 105
1mxi_A_951mxi   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 106

Clusters included in this Subclass
CLUSTER: EH.8.75