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Information on SUBCLASS 8.4.2
Subclass Accession number: 3480
Subclass: 8.4.2 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  
GO : GO:0005489 (>50 %)  
SCOP : 52342 (>75 %)  52343 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 13.3 +/- 13.3
Average RMSD (Å) : 0.733 +/- 0.058

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: hXXpXpXXhhXp
(φψ)-conformation: bbabaaapplaa
Pattern: [AFV][NRW][LW][FY][HLY][AGL][ATV][EPR][DNT][GPS][DES][GSV]x[AL][FY][AFK][DE][E][FLV][EKT]
Conservation:-0.691-0.6910.1271.895-0.173-0.987-0.321-0.469-0.025-0.4690.123-0.987-0.913-0.1381.885-1.0611.4162.049-0.247-0.321
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fnc_*_1971fnc   -198217AWLFLGVPTSSSLLYKEEFEEEEEEEESSGGG-TTHHHHHbbbbbxbwbaaaxplaaaaa
1gvh_A_2901gvh   A290309VNWFHAAENGDVHAFADEVKEEEEEEES-TTT--SHHHHHbbbbbbbabaaaxbUaaaaa
2pia_*_1402pia   -141160FRLYYLTRDPEGTAFFDELTEEEEEEES-GGG-TTHHHHHbbbxbbbabaaabxvaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fnc_*_1971fnc   *     A2PADENOSINE-2'-5'-DIPHOSPHATE G - 203
1fnc_*_1971fnc   *     A2PADENOSINE-2'-5'-DIPHOSPHATE V - 204
1fnc_*_1971fnc   *     A2PADENOSINE-2'-5'-DIPHOSPHATE P - 205
1fnc_*_1971fnc   *     A2PADENOSINE-2'-5'-DIPHOSPHATE T - 206
1fnc_*_1971fnc   *     A2PADENOSINE-2'-5'-DIPHOSPHATE S - 209
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gvh_A_2901gvh   A AC4NA BINDING SITE FOR CHAIN AH - 294
1gvh_A_2901gvh   A AC4NA BINDING SITE FOR CHAIN AH - 302
1gvh_A_2901gvh   A AC4NA BINDING SITE FOR CHAIN AA - 303

Clusters included in this Subclass
CLUSTER: EH.7.171