Information on SUBCLASS 11.3.1 |
Subclass Accession number: 6584
Subclass: 11.3.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.6 (>75 %) 2.6.1 (>75 %) SCOP : 48726 (>75 %) 48727 (>75 %) 53382 (>75 %) 53383 (>75 %) 53384 (>75 %) |
Number of loops: 10 Average sequence ID (%) : 60.6 +/- 23.2 Average RMSD (Å) : 0.330 +/- 0.067 Consensus geometry
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Consensus Sequence: | QpXXpXPhTFGXGTK |
(φψ)-conformation: | bbaabpwppbpaebb |
Pattern: | [DSTV] | [Y] | [FY] | [C] | [Q] | [HNQ] | x | x | [degknrs] | [fltwy] | [P] | [fhlwy] | [T] | [F] | [G] | [AGQS] | [G] | [T] | [KR] |
Conservation: | -1.009 | 1.142 | 0.391 | 1.825 | 0.459 | -0.424 | -1.242 | -1.374 | -1.245 | -1.164 | 1.142 | -1.025 | 0.459 | 0.801 | 0.801 | -0.872 | 0.801 | 0.459 | 0.075 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a3r_L_84 | 1a3r | L | 85 | 103 | VYYCQNNYNYPLTFGAGTK | EEEEEE-SSSS--B---EE | bbbbbxaabxwxxxxaebx |
1b0w_A_84 | 1b0w | A | 85 | 103 | TYYCQQYDDLPYTFGQGTK | EEEEEE-SSSS--B---EE | bbbbbxaabxwxbbxaebx |
1cic_A_85 | 1cic | A | 85 | 103 | DYFCQHCGSYPFTFGSGTK | EEEEEE-SSSS--B---EE | bbbbbbaabxwxbbxaebx |
1ezv_Y_85 | 1ezv | Y | 85 | 103 | TYFCQHHIKFPWTFGAGTK | EEEEEE-SSSS--B---EE | bbbbbbaabxwxbbxaebx |
1ivl_A_84 | 1ivl | A | 85 | 103 | VYFCQQVSEWPFTFGGGTK | EEEEEE-SSSS--B---EE | bbbbbxaabxwxxbxaebx |
1p7k_A_84 | 1p7k | A | 85 | 103 | SYYCQHHYGTPLTFGAGTK | EEEEEE-SSSS--B---EE | bbbbbxaabxwxbbxaebx |
1rzg_B_84 | 1rzg | B | 85 | 103 | TYYCQQHDSSPYTFGQGTK | EEEEEE-SSSS--B---EE | bbbbbxaabxwxbbxaebx |
1wej_L_84 | 1wej | L | 85 | 103 | SYYCQHFWSTPWTFGGGTK | EEEEEE-SSSS--B---EE | bbbxbxaabxwxxxxaebb |
2f5b_L_85 | 2f5b | L | 85 | 103 | TYYCQQLHFYPHTFGGGTR | EEEEEE-SSSS--B---EE | bbbbbbaabxwxpbxaebx |
43c9_A_84 | 43c9 | A | 85 | 103 | DYFCQQHYRAPRTFGGGTK | EEEEEE-SSSS--B---EE | bbbbbxaabxwxxbxaebx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ivl_A_84 | 1ivl | A | IPAISOPROPYL ALCOHOL | F - 87 |
1ivl_A_84 | 1ivl | A | IPAISOPROPYL ALCOHOL | F - 98 |
1p7k_A_84 | 1p7k | A | GOLGLYCEROL | G - 84 |
1p7k_A_84 | 1p7k | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | H - 91 |
1p7k_A_84 | 1p7k | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | Y - 92 |
1p7k_A_84 | 1p7k | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | G - 93 |
1p7k_A_84 | 1p7k | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | T - 94 |
1p7k_A_84 | 1p7k | A | GOLGLYCEROL | K - 103 |
1p7k_A_84 | 1p7k | A | GOLGLYCEROL | L - 104 |
1p7k_A_84 | 1p7k | A | GOLGLYCEROL | E - 105 |
1p7k_A_84 | 1p7k | A | GOLGLYCEROL | L - 106 |
1rzg_B_84 | 1rzg | B | SUCSUCROSE | H - 91 |
1rzg_B_84 | 1rzg | B | SUCSUCROSE | D - 92 |
1rzg_B_84 | 1rzg | B | SUCSUCROSE | S - 93 |
1rzg_B_84 | 1rzg | B | SUCSUCROSE | Y - 96 |
1rzg_B_84 | 1rzg | B | SUCSUCROSE | T - 97 |
1rzg_B_84 | 1rzg | B | SUCSUCROSE | F - 98 |
1rzg_B_84 | 1rzg | B | SUCSUCROSE | G - 99 |
1rzg_B_84 | 1rzg | B | SUCSUCROSE | Q - 100 |
Clusters included in this Subclass |
CLUSTER: HA.10.5 |