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PDB code:

Information on SUBCLASS 2.2.13

Subclass Accession number: 6058 Subclass: 2.2.13 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 9 Average sequence ID (%) : 9.2 +/- 12.3 Average RMSD (Å) : 0.611 +/- 0.169 Consensus geometry d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ezv_A_313	1ezv	A	316	328	HFSLSYKDSGLWG	EEEEE-SS-EEEE	xbbxbbaabbbbb
1fna_*_9	1fna	-	9	21	EVVAATPTSLLIS	EEEEE-SS-EEEE	bxabbbaabbbbb
1j0m_A_398	1j0m	A	398	410	RAVLQRPGFALGL	EEEEE-SS-EEEE	bbbbbbaabbbbb
1kzl_A_145	1kzl	A	148	160	TITHVDDSTFSIM	EEEEE-SS-EEEE	bxabbbaabbbbb
1omw_A_191	1omw	A	195	207	RIIGRGGFGEVYG	EEEEE-SS-EEEE	bxNbbxaabbbxx
1qba_*_289	1qba	-	289	301	YELKIGKKEAQVI	EEEEE-SS-EEEE	bbbbbbaabbbbb
1rdq_E_43	1rdq	E	47	59	KTLGTGSFGRVML	EEEEE-SS-EEEE	bxabbbaabbbbx
1rwz_A_160	1rwz	A	162	174	RIEAKGDVDSIVF	EEEEE-SS-EEEE	bbbbbbaabbbbb
1vhz_A_9	1vhz	A	14	26	ETVARSRLFTVES	EEEEE-SS-EEEE	bxabbbaabbxbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1kzl_A_145	1kzl	A	CRM3-[8-((2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL)-2,4,7-TRIOXO-1,3,8-TRIHYDROPTERIDIN-6-YL]PROPANOIC ACID	T - 145
1kzl_A_145	1kzl	A	CRM3-[8-((2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL)-2,4,7-TRIOXO-1,3,8-TRIHYDROPTERIDIN-6-YL]PROPANOIC ACID	S - 146
1kzl_A_145	1kzl	A	CRM3-[8-((2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL)-2,4,7-TRIOXO-1,3,8-TRIHYDROPTERIDIN-6-YL]PROPANOIC ACID	L - 147
1kzl_A_145	1kzl	A	CRM3-[8-((2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL)-2,4,7-TRIOXO-1,3,8-TRIHYDROPTERIDIN-6-YL]PROPANOIC ACID	T - 148
1kzl_A_145	1kzl	A	CRM3-[8-((2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL)-2,4,7-TRIOXO-1,3,8-TRIHYDROPTERIDIN-6-YL]PROPANOIC ACID	I - 149
1kzl_A_145	1kzl	A	CRM3-[8-((2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL)-2,4,7-TRIOXO-1,3,8-TRIHYDROPTERIDIN-6-YL]PROPANOIC ACID	T - 150
1kzl_A_145	1kzl	A	CRM3-[8-((2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL)-2,4,7-TRIOXO-1,3,8-TRIHYDROPTERIDIN-6-YL]PROPANOIC ACID	I - 159
1kzl_A_145	1kzl	A	CRM3-[8-((2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL)-2,4,7-TRIOXO-1,3,8-TRIHYDROPTERIDIN-6-YL]PROPANOIC ACID	M - 160
1kzl_A_145	1kzl	A	CRM3-[8-((2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL)-2,4,7-TRIOXO-1,3,8-TRIHYDROPTERIDIN-6-YL]PROPANOIC ACID	M - 161
1rdq_E_43	1rdq	E	GOLGLYCEROL	F - 43
1rdq_E_43	1rdq	E	GOLGLYCEROL	D - 44
1rdq_E_43	1rdq	E	GOLGLYCEROL	R - 45
1rdq_E_43	1rdq	E	GOLGLYCEROL	I - 46
1rdq_E_43	1rdq	E	ADPADENOSINE-5'-DIPHOSPHATE	L - 49
1rdq_E_43	1rdq	E	ATPADENOSINE-5'-TRIPHOSPHATE	L - 49
1rdq_E_43	1rdq	E	ADPADENOSINE-5'-DIPHOSPHATE	G - 50
1rdq_E_43	1rdq	E	ATPADENOSINE-5'-TRIPHOSPHATE	G - 50
1rdq_E_43	1rdq	E	PO4PHOSPHATE ION	T - 51
1rdq_E_43	1rdq	E	ADPADENOSINE-5'-DIPHOSPHATE	T - 51
1rdq_E_43	1rdq	E	ATPADENOSINE-5'-TRIPHOSPHATE	T - 51
1rdq_E_43	1rdq	E	PO4PHOSPHATE ION	G - 52
1rdq_E_43	1rdq	E	MGMAGNESIUM ION	G - 52
1rdq_E_43	1rdq	E	ADPADENOSINE-5'-DIPHOSPHATE	G - 52
1rdq_E_43	1rdq	E	ATPADENOSINE-5'-TRIPHOSPHATE	G - 52
1rdq_E_43	1rdq	E	PO4PHOSPHATE ION	S - 53
1rdq_E_43	1rdq	E	MGMAGNESIUM ION	S - 53
1rdq_E_43	1rdq	E	ADPADENOSINE-5'-DIPHOSPHATE	S - 53
1rdq_E_43	1rdq	E	ATPADENOSINE-5'-TRIPHOSPHATE	S - 53
1rdq_E_43	1rdq	E	PO4PHOSPHATE ION	F - 54
1rdq_E_43	1rdq	E	MGMAGNESIUM ION	F - 54
1rdq_E_43	1rdq	E	ADPADENOSINE-5'-DIPHOSPHATE	F - 54
1rdq_E_43	1rdq	E	ATPADENOSINE-5'-TRIPHOSPHATE	F - 54
1rdq_E_43	1rdq	E	ADPADENOSINE-5'-DIPHOSPHATE	G - 55
1rdq_E_43	1rdq	E	ATPADENOSINE-5'-TRIPHOSPHATE	G - 55
1rdq_E_43	1rdq	E	ADPADENOSINE-5'-DIPHOSPHATE	R - 56
1rdq_E_43	1rdq	E	ATPADENOSINE-5'-TRIPHOSPHATE	R - 56
1rdq_E_43	1rdq	E	ADPADENOSINE-5'-DIPHOSPHATE	V - 57
1rdq_E_43	1rdq	E	ATPADENOSINE-5'-TRIPHOSPHATE	V - 57

Clusters included in this Subclass

CLUSTER: HA.4.89

CLUSTER: HA.5.97

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