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Information on SUBCLASS 2.2.16
Subclass Accession number: 486
Subclass: 2.2.16 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0046914 (>75 %)  
Number of loops: 7

Average sequence ID (%) : 16.8 +/- 15.4
Average RMSD (Å) : 0.914 +/- 0.227

Consensus geometry
d (Å): 3 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XpXXGX
(φψ)-conformation: bbaaeb
Pattern: xxxx[ACGIKTV][AFGKLV]x[GNT][hknpr][efhqy][G][cltv][ltv]
Conservation:-0.160-0.590-0.153-0.369-0.590-0.593-0.5780.670-0.484-0.1643.114-0.1520.052
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b6r_A_2211b6r   A223235MAMECFVTPQGLLEEEEEEEETTEEEbbbxbbxbaaexb
1cs6_A_3651cs6   A366378MYQCVAENKHGTVEEEEEEEETTEEExbbbbbbbaaebb
1ex0_A_1551ex0   A158170RMYVAVWTPYGVLEEEEEEEETTEEExbbbbbxbaaebx
1g1c_A_751g1c   A7688SIMVKAINIAGETEEEEEEEETTEEExbbbbbbbaaebb
1lld_A_2751lld   A276288MSVPTLLNRQGVNEEEEEEEETTEEEbxbwbxbbaaebb
1oxx_K_2451oxx   K245257NELEGKVTNEGVVEEEEEEEETTEEExbbbbxxbaaexx
1r0p_A_10761r0p   A10801092FNEVIGRGHFGCVEEEEEEEETTEEEaabxabbbaaebb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1oxx_K_2451oxx   K     IODIODIDE ION K - 250
1oxx_K_2451oxx   K     IODIODIDE ION T - 252
1oxx_K_2451oxx   K     IODIODIDE ION N - 253
1oxx_K_2451oxx   K     IODIODIDE ION E - 254
1oxx_K_2451oxx   K     IODIODIDE ION G - 255
1oxx_K_2451oxx   K     IODIODIDE ION V - 256
1r0p_A_10761r0p   A     KSAK-252A I - 1084
1r0p_A_10761r0p   A     KSAK-252A G - 1085
1r0p_A_10761r0p   A     KSAK-252A R - 1086
1r0p_A_10761r0p   A     KSAK-252A G - 1087
1r0p_A_10761r0p   A     KSAK-252A F - 1089
1r0p_A_10761r0p   A     KSAK-252A V - 1092

Clusters included in this Subclass
CLUSTER: HA.3.59