Information on SUBCLASS 4.1.13 |
Subclass Accession number: 7878
Subclass: 4.1.13 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 5.6 +/- 8.7 Average RMSD (Å) : 0.300 +/- 0.082 Consensus geometry
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Consensus Sequence: | XpXXpXhX |
(φψ)-conformation: | bbaaalbb |
Pattern: | x | x | x | x | [DEGP] | [ADN] | x | [EGR] | [ILV] | [CKLT] | x | [FHIV] |
Conservation: | 0.058 | -0.671 | -0.833 | -0.130 | 0.220 | 0.217 | -0.590 | 0.475 | 2.783 | -0.509 | -1.077 | 0.058 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1i1q_B_152 | 1i1q | B | 155 | 166 | AVRHDADRVCGF | EEEETTTTEEEE | bbbbaaavbbbb |
1k3p_A_57 | 1k3p | A | 57 | 68 | TFIDGDEGILLH | EEEETTTTEEEE | bbbbaaalxbbb |
1kvk_A_48 | 1kvk | A | 50 | 61 | SLNLPNVGIKQV | EEEETTTTEEEE | bbbbaaalbbbb |
5rub_A_70 | 5rub | A | 72 | 83 | YEVDEARELTKI | EEEETTTTEEEE | abbbaaalbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kvk_A_48 | 1kvk | A | ATPADENOSINE-5'-TRIPHOSPHATE | L - 53 |
1kvk_A_48 | 1kvk | A | ATPADENOSINE-5'-TRIPHOSPHATE | N - 55 |
1kvk_A_48 | 1kvk | A | ATPADENOSINE-5'-TRIPHOSPHATE | V - 56 |
Clusters included in this Subclass |
CLUSTER: HA.3.98 |
CLUSTER: HA.5.82 |