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Information on SUBCLASS 4.1.13
Subclass Accession number: 7878
Subclass: 4.1.13 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 5.6 +/- 8.7
Average RMSD (Å) : 0.300 +/- 0.082

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XpXXpXhX
(φψ)-conformation: bbaaalbb
Pattern: xxxx[DEGP][ADN]x[EGR][ILV][CKLT]x[FHIV]
Conservation:0.058-0.671-0.833-0.1300.2200.217-0.5900.4752.783-0.509-1.0770.058
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1i1q_B_1521i1q   B155166AVRHDADRVCGFEEEETTTTEEEEbbbbaaavbbbb
1k3p_A_571k3p   A5768TFIDGDEGILLHEEEETTTTEEEEbbbbaaalxbbb
1kvk_A_481kvk   A5061SLNLPNVGIKQVEEEETTTTEEEEbbbbaaalbbbb
5rub_A_705rub   A7283YEVDEARELTKIEEEETTTTEEEEabbbaaalbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kvk_A_481kvk   A     ATPADENOSINE-5'-TRIPHOSPHATE L - 53
1kvk_A_481kvk   A     ATPADENOSINE-5'-TRIPHOSPHATE N - 55
1kvk_A_481kvk   A     ATPADENOSINE-5'-TRIPHOSPHATE V - 56

Clusters included in this Subclass
CLUSTER: HA.3.98
CLUSTER: HA.5.82