Information on SUBCLASS 4.1.5 |
Subclass Accession number: 6240
Subclass: 4.1.5 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 31 Average sequence ID (%) : 11.5 +/- 14.7 Average RMSD (Å) : 0.413 +/- 0.167 Consensus geometry
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Consensus Sequence: | XpXXpXXX |
(φψ)-conformation: | bbaaalbb |
Pattern: | x | x | [cdehknqrst] | x | x | [cdeknqrst] | [degknqrst] | [adegknqrst] | x | x |
Conservation: | 0.096 | -0.741 | 1.800 | -1.070 | -0.138 | 1.189 | 0.482 | -0.151 | -1.537 | 0.070 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a06_*_34 | 1a06 | - | 37 | 46 | AEDKRTQKLV | EEETTT--EE | bbxaaavxxb |
1a4s_A_38 | 1a4s | A | 40 | 49 | VFEPATGRVL | EE-TTT--EE | bbbaaavxxa |
1bxs_A_36 | 1bxs | A | 39 | 48 | VFNPATEEKL | EE-TTT--EE | bbbaaavxxa |
1c39_A_62 | 1c39 | A | 66 | 75 | QIQKSNGKET | EEETTTTEEE | bbxaaalxbb |
1c5e_A_36 | 1c5e | A | 38 | 47 | MLDTSSRKLV | EE-TTT--EE | bxxaaavxxb |
1cru_A_112 | 1cru | A | 120 | 129 | TYNKSTDTLE | EEETTTTEEE | bxbaaalbbb |
1dp4_A_376 | 1dp4 | A | 380 | 389 | DMDPETGAFR | EE-TTT--EE | bxxaaavxbb |
1e9g_A_106 | 1e9g | A | 106 | 113 | .SHPETKAV. | .EETTTTEE. | .xxaaalbx. |
1euh_A_19 | 1euh | A | 22 | 31 | IYEPASGAEL | EE-TTT--EE | bbxaaavxxa |
1fn9_A_48 | 1fn9 | A | 49 | 58 | VVCMHCLGVV | EEETTTTEEE | bbxaaavxxa |
1gxs_A_24 | 1gxs | A | 30 | 39 | TIDDNNGRAL | EEETTTTEEE | xabaaavbbb |
1hs6_A_16 | 1hs6 | A | 26 | 35 | SVDFTRRTLT | EEETTTTEEE | bxxaaalbbb |
1ie9_A_279 | 1ie9 | A | 279 | 287 | .FTMDDMSWT | .EETTTTEEE | .xbaaNvbxx |
1jks_A_25 | 1jks | A | 30 | 39 | CREKSTGLQY | EEETTT--EE | bbxaaavxxb |
1khi_A_51 | 1khi | A | 59 | 68 | STSAATGQHR | EE-TTT--EE | bbxaaavxxb |
1ksi_A_254 | 1ksi | A | 262 | 271 | IYDLEKHKSR | EEETTTTEEE | bxxaaalbxb |
1mq4_A_146 | 1mq4 | A | 150 | 159 | AREKQSKFIL | EEETTT--EE | bbxaaavxxb |
1mxg_A_116 | 1mxg | A | 118 | 127 | EWNPFVGDYT | EEETTTTEEE | bxbaaavbxb |
1n8j_A_110 | 1n8j | A | 110 | 117 | .MREDEGLA. | .EETTTTEE. | .xxaaavbx. |
1nu0_A_14 | 1nu0 | A | 19 | 28 | VGQRITGTAR | EEETTTTEEE | bbbaaavbbb |
1nuy_A_1180 | 1nuy | A | 1185 | 1194 | MLDPAIGEFI | EEETTTTEEE | bxxaaavbxb |
1o6l_A_164 | 1o6l | A | 169 | 178 | VREKATGRYY | EEETTT--EE | bbxaaavxxb |
1q1r_A_214 | 1q1r | A | 218 | 227 | EMSTDQQKVT | EE-TTT--EE | bbxaaalbxa |
1q41_A_70 | 1q41 | A | 73 | 82 | AKLCDSGELV | EEETTT--EE | bbxaaavxxb |
1qmv_A_118 | 1qmv | A | 118 | 125 | .LKTDEGIA. | .EETTTTEE. | .xxaaavbx. |
1rdq_E_56 | 1rdq | E | 60 | 69 | VKHKESGNHY | EEETTT--EE | bbxaaavxxb |
1tie_*_115 | 1tie | - | 119 | 128 | QVSDQLHSYK | EEETTTTEEE | xabaaalbbx |
1uj2_A_107 | 1uj2 | A | 111 | 120 | VYDFVSHSRK | EEETTTTEEE | bbbaaalbxx |
1uu3_A_95 | 1uu3 | A | 99 | 108 | ARELATSREY | EEETTT--EE | bbxaaavxxb |
1vjl_A_3 | 1vjl | A | 10 | 19 | ALDRVSNTPV | EE-TTT--EE | bxpaaalbwb |
1vps_A_144 | 1vps | A | 144 | 153 | PTDTVNTKGI | EEETTTTEEE | xabaaavbeb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1o6l_A_164 | 1o6l | A | AC1ANP BINDING SITE FOR CHAIN A | A - 179 |
1o6l_A_164 | 1o6l | A | AC1ANP BINDING SITE FOR CHAIN A | K - 181 |
1uu3_A_95 | 1uu3 | A | AC1LY4 BINDING SITE FOR CHAIN A | A - 109 |
1uu3_A_95 | 1uu3 | A | AC1LY4 BINDING SITE FOR CHAIN A | K - 111 |
Clusters included in this Subclass |
CLUSTER: HA.4.70 |
CLUSTER: HA.4.88 |
CLUSTER: HA.5.22 |