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Information on SUBCLASS 4.12.1
Subclass Accession number: 668
Subclass: 4.12.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0008238 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 17.8 +/- 25.7
Average RMSD (Å) : 0.520 +/- 0.164

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: phXcpGXh
(φψ)-conformation: bbpaalbb
Pattern: x[HQRY]xx[ADK]x[GM][FKL]x
Conservation:-0.7530.853-0.722-0.7130.4650.1332.044-0.200-1.107
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bjt_*_10581bjt   -10581066PRFNKEGKPEE-TT--EExxbxaavxx
1hxx_A_2531hxx   A262270QYQFDFGLREE--TTSEEbbbxaagxb
1kb0_A_3251kb0   A331339LHAPKNGFFEE--TTSEEbbbxaavbx
1kv9_A_3121kv9   A318326MQAPKNGFFEE--TTSEEbbbxaavbb
1lsh_B_14061lsh   B14111419FRLSAHMKAEE--SSSEEbbbpaalbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kb0_A_3251kb0   A     CACALCIUM ION K - 335
1kb0_A_3251kb0   A     TFBTETRAHYDROFURAN-2-CARBOXYLIC ACID K - 335
1kb0_A_3251kb0   A     PQQPYRROLOQUINOLINE QUINONE K - 335
1kv9_A_3121kv9   A     CACALCIUM ION K - 322
1kv9_A_3121kv9   A     PQQPYRROLOQUINOLINE QUINONE K - 322
1kv9_A_3121kv9   A     ACNACETONE K - 322
1lsh_B_14061lsh   B     UPLUNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID L - 1407
1lsh_B_14061lsh   B     UPLUNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID A - 1409
1lsh_B_14061lsh   B     UPLUNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID K - 1410
1lsh_B_14061lsh   B     UPLUNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID A - 1419
1lsh_B_14061lsh   B     UPLUNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID A - 1421
1lsh_B_14061lsh   B     UPLUNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID A - 1422
1lsh_B_14061lsh   B     UPLUNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID I - 1423
1lsh_B_14061lsh   B     UPLUNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID W - 1425

Clusters included in this Subclass
CLUSTER: HA.4.122
CLUSTER: HA.5.136