Information on SUBCLASS 5.1.6 |
Subclass Accession number: 701
Subclass: 5.1.6 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 21 Average sequence ID (%) : 18.8 +/- 19.0 Average RMSD (Å) : 0.552 +/- 0.133 Consensus geometry
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Consensus Sequence: | XXXppGpXX |
(φψ)-conformation: | bbpaagpbb |
Pattern: | [fgikltv] | x | x | [deknpqrs] | [ADEKNQS] | [GKQ] | [deknrst] | x | [afiklmtv] | x |
Conservation: | -0.536 | -0.527 | -0.345 | 0.003 | 0.615 | 2.554 | 0.077 | -0.729 | -0.197 | -0.916 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bkf_*_21 | 1bkf | - | 28 | 37 | GMLEDGKKFD | EEETTS-EEE | bbxaagxxab |
1buc_A_143 | 1buc | A | 145 | 154 | TKNDDGTYTL | EE-TTS-EEE | xxbaavbbbx |
1e25_A_240 | 1e25 | A | 250 | 259 | ILLPDGRPLL | EE-TTS-EEE | bxxaavxxbx |
1gpp_A_99 | 1gpp | A | 112 | 121 | KKAPDGRIVE | EE-TTS-EEE | bxxaavxxbx |
1hdm_B_5 | 1hdm | B | 12 | 21 | LLDDAGTPKD | EE-TTS-EEE | bbxaavxwab |
1itw_A_433 | 1itw | A | 437 | 446 | VTDESGKLLL | EEETT--EEE | bbxaavxxab |
1jvw_A_88 | 1jvw | A | 94 | 103 | GRLRDGTVFD | EE-TTS-EEE | bbxaavpxab |
1kwg_A_549 | 1kwg | A | 549 | 558 | LTFQDGKGAL | EEETTS-EEE | bbxaavxxab |
1m8a_A_36 | 1m8a | A | 39 | 48 | FHTKKKLSVC | EEETT--EEE | xbbaavxbbp |
1n9p_A_225 | 1n9p | A | 236 | 245 | RQTPEGEFLP | EE-TTS-EEE | bbxaavxxbw |
1nbc_A_51 | 1nbc | A | 60 | 69 | IIGSNGSYNG | EE-TT--EEE | bbxaavxbbx |
1o5u_A_39 | 1o5u | A | 50 | 59 | VTTEDGKKYV | EEETT--EEE | bbxaavxbbb |
1psu_A_107 | 1psu | A | 114 | 123 | IVNQQQKTVA | EE-TTS-EEE | bbxaavxxab |
1q6h_A_141 | 1q6h | A | 148 | 157 | GTLIDGKEFD | EEETTS-EEE | bbxaagxxab |
1qme_A_79 | 1qme | A | 79 | 88 | IYDRNGVPIA | EE-TTS-EEE | bbxaavxwab |
1r17_A_349 | 1r17 | A | 349 | 358 | IKDNSGEIIA | EEETT--EEE | xbxaagxxab |
1s3i_A_286 | 1s3i | A | 292 | 301 | IQLEDGKMMP | EEETTS-EEE | bbxaavxxbp |
1s68_A_115 | 1s68 | A | 123 | 132 | VTTESGDVTY | EEETT--EEE | bbxaavxbbx |
1svp_A_239 | 1svp | A | 246 | 255 | TWNSKGKTIK | EE-TT--EEE | bbxaavxxbb |
2acy_*_36 | 2acy | - | 40 | 49 | QNTDQGTVQG | EE-TTS-EEE | bxbaavbbbe |
2sak_*_24 | 2sak | - | 31 | 40 | GVDSKGNELL | EE-TT--EEE | xbxaavxxab |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.3.56 |
CLUSTER: HA.4.34 |
CLUSTER: HA.5.59 |
CLUSTER: HA.6.33 |