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Information on SUBCLASS 5.1.6
Subclass Accession number: 701
Subclass: 5.1.6 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 21

Average sequence ID (%) : 18.8 +/- 19.0
Average RMSD (Å) : 0.552 +/- 0.133

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXXppGpXX
(φψ)-conformation: bbpaagpbb
Pattern: [fgikltv]xx[deknpqrs][ADEKNQS][GKQ][deknrst]x[afiklmtv]x
Conservation:-0.536-0.527-0.3450.0030.6152.5540.077-0.729-0.197-0.916
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bkf_*_211bkf   -2837GMLEDGKKFDEEETTS-EEEbbxaagxxab
1buc_A_1431buc   A145154TKNDDGTYTLEE-TTS-EEExxbaavbbbx
1e25_A_2401e25   A250259ILLPDGRPLLEE-TTS-EEEbxxaavxxbx
1gpp_A_991gpp   A112121KKAPDGRIVEEE-TTS-EEEbxxaavxxbx
1hdm_B_51hdm   B1221LLDDAGTPKDEE-TTS-EEEbbxaavxwab
1itw_A_4331itw   A437446VTDESGKLLLEEETT--EEEbbxaavxxab
1jvw_A_881jvw   A94103GRLRDGTVFDEE-TTS-EEEbbxaavpxab
1kwg_A_5491kwg   A549558LTFQDGKGALEEETTS-EEEbbxaavxxab
1m8a_A_361m8a   A3948FHTKKKLSVCEEETT--EEExbbaavxbbp
1n9p_A_2251n9p   A236245RQTPEGEFLPEE-TTS-EEEbbxaavxxbw
1nbc_A_511nbc   A6069IIGSNGSYNGEE-TT--EEEbbxaavxbbx
1o5u_A_391o5u   A5059VTTEDGKKYVEEETT--EEEbbxaavxbbb
1psu_A_1071psu   A114123IVNQQQKTVAEE-TTS-EEEbbxaavxxab
1q6h_A_1411q6h   A148157GTLIDGKEFDEEETTS-EEEbbxaagxxab
1qme_A_791qme   A7988IYDRNGVPIAEE-TTS-EEEbbxaavxwab
1r17_A_3491r17   A349358IKDNSGEIIAEEETT--EEExbxaagxxab
1s3i_A_2861s3i   A292301IQLEDGKMMPEEETTS-EEEbbxaavxxbp
1s68_A_1151s68   A123132VTTESGDVTYEEETT--EEEbbxaavxbbx
1svp_A_2391svp   A246255TWNSKGKTIKEE-TT--EEEbbxaavxxbb
2acy_*_362acy   -4049QNTDQGTVQGEE-TTS-EEEbxbaavbbbe
2sak_*_242sak   -3140GVDSKGNELLEE-TT--EEExbxaavxxab
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bkf_*_211bkf   *     FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN Y - 26
1bkf_*_211bkf   *     FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN G - 28
1bkf_*_211bkf   *     FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN F - 36
1bkf_*_211bkf   *     FK58-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN D - 37
1buc_A_1431buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 159
1buc_A_1431buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 160
1buc_A_1431buc   A     CAAACETOACETYL-COENZYME A F - 160
1buc_A_1431buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 161
1buc_A_1431buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 162
1buc_A_1431buc   A     CAAACETOACETYL-COENZYME A T - 162
1kwg_A_5491kwg   A     ACTACETATE ION R - 560
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL I - 37
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL I - 38
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL F - 39
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL H - 40
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL T - 41
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL K - 44
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL S - 46
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL V - 47
1m8a_A_361m8a   A     IOH2-PROPANOL, ISOPROPANOL C - 48
1n9p_A_2251n9p   A     MSESELENOMETHIONINE S - 225
1n9p_A_2251n9p   A     MSESELENOMETHIONINE A - 226
1s68_A_1151s68   A     AMPADENOSINE MONOPHOSPHATE F - 119
1s68_A_1151s68   A     AMPADENOSINE MONOPHOSPHATE D - 120

Clusters included in this Subclass
CLUSTER: HA.3.56
CLUSTER: HA.4.34
CLUSTER: HA.5.59
CLUSTER: HA.6.33