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Information on SUBCLASS 5.10.1
Subclass Accession number: 732
Subclass: 5.10.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 14

Average sequence ID (%) : 7.8 +/- 10.5
Average RMSD (Å) : 0.936 +/- 0.350

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XpXXpXpXX
(φψ)-conformation: bbpaababb
Pattern: xx[HKRST]x[adekrst][dekns]x[dhnpqs]xxxx
Conservation:-0.7230.1722.573-0.691-0.4351.036-0.1280.641-0.663-0.827-0.678-0.277
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b63_A_1071b63   A111122TSRTAEQQEAWQEEE-TT-SSEEEbbbxaabaxbbb
1cjx_A_361cjx   A3849VATHRSKNVHLYEEEESSSSEEEEabbpaNbabbbb
1fgu_A_3301fgu   A331342KITVRSNNREVAEEE-SSSS-EEExxbxaabaxbbx
1h0h_B_1261h0h   B126135.RKVAESNQMA..EE-TTSS-EE..bxxaabaxbb.
1j71_A_2781j71   A278289ILKDSDSSICYFEEE-SSSS-EEEbbbxaaxaxbbx
1juv_A_1051juv   A106117QVSSPNAPFETMEEE-TTSS-EEEbbbpaabapbbx
1mda_H_2691mda   H269280VAKLKNTDGIMIEEEETTTTEEEEbbbxaababbxb
1n8y_C_5811n8y   C582593GVKPDLSYMPIWEE--TT-S--EEvxbpaabaxxxb
1q44_A_291q44   A2940KEKGWLVSEIYEEEE-SSSSEEEEbbxxaababbbx
1q52_A_371q52   A3950YHRHVDDATVRVEEEESSSSEEEEbbbxaaxabbbb
1qdl_B_1591qdl   B161172AIHHEEYPIYGVEEEESSSSEEEEbbbxaaxabbbb
1s7j_A_1751s7j   A178189TASGDSVDFVSREEE-SSSSEEEEbexxaababbbb
1tn3_*_491tn3   -5061CLKGTKVHMKCFEEE-SSSSEEEEbbxxaaxabbbb
3lkf_A_323lkf   A4051FIKDKSYDKDTLEEEETTSSSEEExbxbaababxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b63_A_1071b63   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER L - 110
1b63_A_1071b63   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER S - 112
1h0h_B_1261h0h   B     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID R - 126
1q44_A_291q44   A     MLAMALONIC ACID L - 34
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h0h_B_1261h0h   B AC7EPE BINDING SITE FOR CHAIN AR - 126

Clusters included in this Subclass
CLUSTER: HA.4.124
CLUSTER: HA.5.35
CLUSTER: HA.6.40
CLUSTER: HA.7.31