Information on SUBCLASS 5.26.1 |
Subclass Accession number: 6405
Subclass: 5.26.1 ![]() Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 5 Average sequence ID (%) : 16.0 +/- 18.2 Average RMSD (Å) : 0.860 +/- 0.365 Consensus geometry
|
Consensus Sequence: | XpppppcpX |
(φψ)-conformation: | bbpaababb |
Pattern: | [STW] | [AFIKL] | x | [DQRST] | [dh] | x | [GNS] | [DHKNQ] | [DNS] | x | [klv] | [ALVY] | [AL] | x | [gim] |
Conservation: | 0.766 | -1.178 | -0.251 | -0.433 | -0.026 | 0.295 | 1.226 | 0.172 | 2.147 | -0.992 | -0.784 | -0.300 | 1.334 | -0.739 | -1.238 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1clo_H_67 | 1clo | H | 68 | 82 | TISRDKSQSILYLQM | EEEE-SSSSEEEEEE | bbbbxaaxabbbbxb |
1fgu_A_330 | 1fgu | A | 330 | 344 | TKITVRSNNREVAKR | EEEE-SSSS-EEEEE | bxxbxaabaxbbxbb |
1kxq_E_65 | 1kxq | E | 66 | 80 | TLSQDNNKNTVYLQM | EEEE-SSSSEEEEEE | bxbbxaaxabbbbxb |
1qks_A_401 | 1qks | A | 404 | 418 | WATSHMGDDSVALIG | EEEEBSSSSEEEEEE | bbbbbaabaxbbbbx |
7ahl_A_34 | 7ahl | A | 41 | 55 | SFIDDKNHNKKLLVI | EEE--TTSSSEEEEE | bbbbxaababxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qks_A_401 | 1qks | A | GOLGLYCEROL | G - 401 |
1qks_A_401 | 1qks | A | GOLGLYCEROL | P - 402 |
Clusters included in this Subclass |
CLUSTER: HA.6.80 |