Information on SUBCLASS 5.3.8 |
Subclass Accession number: 717
Subclass: 5.3.8 ![]() Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 3 Average sequence ID (%) : 15.9 +/- 14.4 Average RMSD (Å) : 1.367 +/- 0.058 Consensus geometry
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Consensus Sequence: | XpXppGpXX |
(φψ)-conformation: | bbpaalpbb |
Pattern: | [GSV] | x | [FVY] | [KV] | x | [STV] | x | [QT] | [AD] | [EN] | [DNT] | [G] | [KT] | [QTW] | x | [DE] | [ADG] | [EGT] | x | [ANQ] | [IV] | [KV] | [HIV] |
Conservation: | -1.002 | -0.580 | 0.265 | -0.071 | -0.580 | -0.411 | -0.833 | 0.373 | 0.300 | 0.837 | 0.096 | 3.221 | 0.404 | -0.411 | -0.833 | 1.522 | -0.496 | -0.833 | -1.171 | -0.580 | 1.353 | -0.071 | -0.496 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h7w_A_402 | 1h7w | A | 406 | 428 | VQFVRTEQDETGKWNEDEDQIVH | EEEEEEEE-TTS-EEEEEEEEEE | bbbbxbbxbaaUxxbbxaabbbb |
1io1_A_304 | 1io1 | A | 305 | 327 | SVVKMSYTDNNGKTIDGGLAVKV | EEEEEEEE-TTS-EEEEEEEEEE | bxbbxbbbxaavxbbxbxxbbxb |
1qz1_A_73 | 1qz1 | A | 73 | 95 | GIYKCVVTAEDGTQSEATVNVKI | EEEEEEEE-TTS-EEEEEEEEEE | exxbbbbbxaavxbbbbbbxbxb |
Clusters included in this Subclass |
CLUSTER: HA.5.137 |