|
|
|
|
|
|
|
| Information on SUBCLASS 6.10.1 |
|
Subclass Accession number: 774
Subclass: 6.10.1 
Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: 
 Consensus coordinates:
|
Number of loops: 8 Average sequence ID (%) : 13.8 +/- 15.8 Average RMSD (Å) : 0.850 +/- 0.233 Consensus geometry
|
| Consensus Sequence: | hppppcXXhX |
| (φψ)-conformation: | bbapllppbb |
| Pattern: | x | x | [cimtv] | [cdnstv] | [dekn] | [ehknrt] | [dr] | [DGN] | x | x | [GIV] | x | x | x |
| Conservation: | -0.770 | -0.769 | 0.212 | -0.381 | 0.386 | -0.116 | 0.206 | 2.924 | -0.880 | -0.859 | 0.938 | -0.115 | -0.099 | -0.677 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1d0n_A_641 | 1d0n | A | 643 | 656 | FACSNKIGRFVIEE | EEEE-TTT--EEEE | bbbbaplUbxbbbx |
| 1g8p_A_172 | 1g8p | A | 172 | 185 | ENVVERDGLSIRHP | EEEE--TT--EEEE | bbbbablvbbxbbx |
| 1h09_A_290 | 1h09 | A | 292 | 305 | YYMTNERGNMVSNE | EEEE-GGG--EEEE | bbbbaplvxxbbxb |
| 1je0_A_34 | 1je0 | A | 37 | 50 | KLTNENRGFLVYTG | EEEE-GGG--EEEE | bxabapUvxxbbbb |
| 1k7j_A_183 | 1k7j | A | 183 | 196 | TVIDLTDDTPVVVR | EEEE-GGG--EEEE | xbbxaxllbpbxab |
| 1o0w_A_186 | 1o0w | A | 190 | 203 | VRTEKNDGDRIFVV | EEEE--TTS-EEEE | abbbaxvgxxbxbb |
| 1odk_A_35 | 1odk | A | 38 | 51 | RRYNDHRGLWGYTG | EEEE-GGG--EEEE | bxabapUvxpbbbb |
| 1vhw_A_35 | 1vhw | A | 38 | 51 | VQVCDVRNMFGYTG | EEEE-GGG--EEEE | bxabNxlvxxbbbb |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1k7j_A_183 | 1k7j | A | MSESELENOMETHIONINE | L - 187 |
| 1k7j_A_183 | 1k7j | A | MSESELENOMETHIONINE | R - 196 |
| 1vhw_A_35 | 1vhw | A | ADNADENOSINE | R - 44 |
| Clusters included in this Subclass |
| CLUSTER: HA.5.111 |
| CLUSTER: HA.7.16 |
| For any comment or web-related incidence, send an email to the webmaster. |
|