Information on SUBCLASS 8.7.1 |
Subclass Accession number: 6523
Subclass: 8.7.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 10.5 +/- 16.5 Average RMSD (Å) : 1.262 +/- 0.403 Consensus geometry
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Consensus Sequence: | XXXXpXXXpXXh |
(φψ)-conformation: | bbppbaabppbb |
Pattern: | x | x | x | x | [cnpt] | [DGNQT] | x | [dehktw] | x | [DEKNP] | x | x | [CIKLV] | x |
Conservation: | -0.331 | -0.928 | -0.736 | -0.840 | 0.549 | 1.200 | 0.023 | -0.795 | -0.343 | 2.009 | -0.626 | 0.176 | 1.667 | -1.027 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d0g_R_112 | 1d0g | R | 113 | 126 | KVGDCTPWSDIECV | EEE--BTTB--EEE | xabxxbaabxxbbb |
1du3_A_70 | 1du3 | A | 72 | 85 | ELSPCTTTRNTVCQ | EEE---SSS--EEE | xabxxbaabbpbbb |
1ext_A_123 | 1ext | A | 125 | 138 | VHLSCQEKQNTVCT | EEE--BTTB--EEE | xabppbaabxpxbb |
1ext_A_83 | 1ext | A | 84 | 97 | EISSCTVDRDTVCG | EEE--BTTB--EEE | xabxxbaabxxbbb |
1i3z_A_63 | 1i3z | A | 63 | 76 | YRIETDAHTPRTIF | EEE---TTS---EE | bbxxbxaabppbbb |
1io7_A_340 | 1io7 | A | 346 | 359 | TEKVPNEVLNGYKR | EEE---SSB--EEE | bbxxxbaaxbbbab |
1jhf_A_164 | 1jhf | A | 166 | 179 | ELLPENSEFKPIVV | EEE-SSTT---EEE | bbxxbbaaxbxxbb |
1qks_A_516 | 1qks | A | 519 | 532 | FSVWNGKDQESALV | EEEE--TTS--EEE | bxbxbxaabxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i3z_A_63 | 1i3z | A | PTRO-PHOSPHOTYROSINE | E - 66 |
1qks_A_516 | 1qks | A | DHEHEME D | W - 522 |
Clusters included in this Subclass |
CLUSTER: HA.8.72 |
CLUSTER: HA.9.12 |