Information on SUBCLASS 9.18.1 |
Subclass Accession number: 6563
Subclass: 9.18.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0008483 (>75 %) GO:0016769 (>75 %) GO:0016782 (>50 %) GO:0016783 (>50 %) SCOP : 53382 (>75 %) 53383 (>75 %) 53402 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 58.3 +/- -4.4 Average RMSD (Å) : 0.300 +/- 0.000 Consensus geometry
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Consensus Sequence: | FShHKhpGPpGhG |
(φψ)-conformation: | bbaaaalppplbb |
Pattern: | [FLY] | [AMY] | [SV] | [F] | [S] | [AG] | [H] | [K] | [FIL] | [HY] | [G] | [P] | [KT] | [G] | [IV] | [G] | [AI] | [LT] | [Y] | [IV] |
Conservation: | -0.781 | -1.434 | -1.335 | 0.877 | -0.027 | -0.624 | 1.781 | 0.425 | -0.931 | 0.304 | 0.877 | 1.329 | -0.883 | 0.877 | -0.249 | 0.877 | -1.109 | -1.052 | 1.329 | -0.249 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eg5_A_196 | 1eg5 | A | 196 | 215 | YASFSAHKFHGPKGVGITYI | EEEEEGGGGTS-TT-EEEEE | bbbbbaaaavxxxvbbbbbb |
1jf9_A_219 | 1jf9 | A | 219 | 238 | FYVFSGHKLYGPTGIGILYV | EEEEEGGGTTS-SS-EEEEE | bbbbbaaaavbxxvbbbbbb |
1p3w_A_199 | 1p3w | A | 199 | 218 | LMSFSGHKIYGPKGIGALYV | EEEEESTTTTS-SS-EEEEE | bbxbbaaaavxxxvbbbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1eg5_A_196 | 1eg5 | A | MSESELENOMETHIONINE | F - 199 |
1eg5_A_196 | 1eg5 | A | PLPPYRIDOXAL-5'-PHOSPHATE | S - 200 |
1eg5_A_196 | 1eg5 | A | PLPPYRIDOXAL-5'-PHOSPHATE | H - 202 |
1eg5_A_196 | 1eg5 | A | PLPPYRIDOXAL-5'-PHOSPHATE | K - 203 |
1eg5_A_196 | 1eg5 | A | MSESELENOMETHIONINE | F - 204 |
1eg5_A_196 | 1eg5 | A | MSESELENOMETHIONINE | G - 206 |
1eg5_A_196 | 1eg5 | A | MSESELENOMETHIONINE | P - 207 |
1eg5_A_196 | 1eg5 | A | PLPPYRIDOXAL-5'-PHOSPHATE | V - 210 |
1eg5_A_196 | 1eg5 | A | MSESELENOMETHIONINE | I - 212 |
1jf9_A_219 | 1jf9 | A | PLPPYRIDOXAL-5'-PHOSPHATE | S - 223 |
1jf9_A_219 | 1jf9 | A | PLPPYRIDOXAL-5'-PHOSPHATE | H - 225 |
1jf9_A_219 | 1jf9 | A | PLPPYRIDOXAL-5'-PHOSPHATE | K - 226 |
1p3w_A_199 | 1p3w | A | PLPPYRIDOXAL-5'-PHOSPHATE | F - 202 |
1p3w_A_199 | 1p3w | A | PLPPYRIDOXAL-5'-PHOSPHATE | S - 203 |
1p3w_A_199 | 1p3w | A | PLPPYRIDOXAL-5'-PHOSPHATE | G - 204 |
1p3w_A_199 | 1p3w | A | PLPPYRIDOXAL-5'-PHOSPHATE | H - 205 |
1p3w_A_199 | 1p3w | A | PLPPYRIDOXAL-5'-PHOSPHATE | K - 206 |
1p3w_A_199 | 1p3w | A | PLPPYRIDOXAL-5'-PHOSPHATE | G - 212 |
1p3w_A_199 | 1p3w | A | PLPPYRIDOXAL-5'-PHOSPHATE | I - 213 |
Clusters included in this Subclass |
CLUSTER: HA.9.45 |