Logo
Information on SUBCLASS 0.1.7
Subclass Accession number: 8069
Subclass: 0.1.7 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 18

Average sequence ID (%) : 9.0 +/- 13.4
Average RMSD (Å) : 0.606 +/- 0.135

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XXhX
(φψ)-conformation: aabb
Pattern: x[cdeknqry]xxx[ehkpqt]x[afilmtv]xx
Conservation:-0.740-0.573-1.147-0.100-0.3391.1400.0122.069-0.322-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b0z_A_1631b0z   A163172KEEARKRIYVHHHHGGGEEEaaaaaaabbb
1cpt_*_3801cpt   -391400FEELLPKLKSHHHHGGGEEEaaaaaaabab
1dj2_A_1981dj2   A212220ADRLEPYIT.HHHHTTTEE.aaaaaaapb.
1dj3_A_1971dj3   A211219AERLEPFIA.HHHHTTTEE.aaaaaaapb.
1dp4_A_2671dp4   A270279ARQAFQAAKIHHHHGGGEEEaaaaaaabbb
1hyo_A_2661hyo   A266274MDALMPFVV.HHHHGGGEE.aaaaaaaxb.
1ivh_A_2601ivh   A273282TIPYLHVREAHHHHHTT-EEaaaaaaaxbb
1iwe_A_2141iwe   A225233AERIRPMVR.HHHHGGGEE.aaaaaaaxb.
1ka8_A_41ka8   A514TFDFIGYLETHHHHGGGEEEaaaaaaabbx
1l5w_A_3291l5w   A333342WAITSKTFAYHHHHTTTEEEaaaaaaaxbb
1l7d_A_3281l7d   A340348LNFLTPHVD.HHHHGGGEE.aaaaaaaxb.
1lcy_A_161lcy   A2130VEKTAPAVVYHHHHGGGEEEaaaaaaaxbb
1li4_A_1071li4   A112120WCIEQTLYF.HHHHTTTEE.aaaaaaabx.
1mio_A_151mio   A1827KKTRSGHIVIHHHHGGGEEEaaaaaaabbb
1o9j_A_4781o9j   A479488EYGIHEYTEVHHHHGGGEEEaaaaaaabbx
1qa7_A_21qa7   A615AGLVRKNLVQHHHHHTTEEEaaaaaaaxbx
1qgu_A_211qgu   A2433RKERRKHMMVHHHHGGGEEEaaaaaaabbb
3pcg_A_1643pcg   A164173PQRRETLIAKHHHHGGGEEEaaaaaaaxxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cpt_*_3801cpt   *     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 380
1cpt_*_3801cpt   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 382
1cpt_*_3801cpt   *     HEMPROTOPORPHYRIN IX CONTAINING FE A - 383
1cpt_*_3801cpt   *     HEMPROTOPORPHYRIN IX CONTAINING FE E - 386
1cpt_*_3801cpt   *     HEMPROTOPORPHYRIN IX CONTAINING FE M - 387
1ivh_A_2601ivh   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 276
1ivh_A_2601ivh   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 277
1ivh_A_2601ivh   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 280
1ivh_A_2601ivh   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 281
1ivh_A_2601ivh   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 282
1qa7_A_21qa7   A     NFAPHENYLALANINE AMIDE Q - 15
1qa7_A_21qa7   A     NFAPHENYLALANINE AMIDE F - 16

Clusters included in this Subclass
CLUSTER: HE.2.29
CLUSTER: HE.3.60
CLUSTER: HE.4.185
CLUSTER: HE.4.211
CLUSTER: HE.4.68