Information on SUBCLASS 2.3.12 |
Subclass Accession number: 5374
Subclass: 2.3.12 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 20.0 +/- 19.1 Average RMSD (Å) : 0.660 +/- 0.182 Consensus geometry
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Consensus Sequence: | pXhDhh |
(φψ)-conformation: | aababb |
Pattern: | [FILV] | [AEPT] | x | [ALT] | [knt] | [EGQ] | x | [FGTV] | [DP] | [fgy] | [lv] | x | [LV] |
Conservation: | 0.628 | -0.653 | -0.609 | -0.388 | -0.753 | 0.452 | -0.188 | -1.256 | 2.329 | 0.286 | -0.177 | -0.994 | 1.322 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1coz_A_15 | 1coz | A | 21 | 33 | LERAKQLGDYLVV | HHHHHTTSSEEEE | aaaaaaababbbb |
1jnd_A_207 | 1jnd | A | 207 | 219 | IPALNGLVDFVNL | HHHHHTT-SEEEE | aaaaaaababbbb |
1ovn_A_35 | 1ovn | A | 35 | 47 | FEKTVERFPYSVV | HHHHHTTSSEEEE | aaaaaaabwbbbb |
1qjc_A_16 | 1qjc | A | 22 | 34 | VTRATQMFDHVIL | HHHHHTTSSEEEE | aaaaaaababbxx |
2cev_A_203 | 2cev | A | 211 | 223 | IAYLKERTDGVHL | HHHHHTT-SEEEE | aaaaaaNbabbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1coz_A_15 | 1coz | A | CTPCYTIDINE-5'-TRIPHOSPHATE | G - 16 |
1coz_A_15 | 1coz | A | CTPCYTIDINE-5'-TRIPHOSPHATE | H - 17 |
1coz_A_15 | 1coz | A | CTPCYTIDINE-5'-TRIPHOSPHATE | L - 20 |
1coz_A_15 | 1coz | A | CTPCYTIDINE-5'-TRIPHOSPHATE | R - 23 |
2cev_A_203 | 2cev | A | MNMANGANESE (II) ION | D - 226 |
PDB Site Annotated loops in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.5.149 |