Logo
Information on SUBCLASS 2.3.4
Subclass Accession number: 5366
Subclass: 2.3.4 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 17

Average sequence ID (%) : 12.8 +/- 17.3
Average RMSD (Å) : 0.671 +/- 0.186

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: pXhpXh
(φψ)-conformation: aababb
Pattern: xxxxxx[adeknqst]x[afltv][adenrst]xxx
Conservation:-0.9690.495-1.492-0.8180.4390.4840.602-0.5461.1272.145-0.787-0.101-0.579
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b35_C_1061b35   C106118HMGKVANAFTYWRHHHHHHTT-SEEEaaaaaaaababbb
1gdh_A_361gdh   A3850EMIETAKSVDALLHHHHHHTT-SEEEaaaaaaaababbb
1hdi_A_2201hdi   A222234LINNMLDKVNEMIHHHHHHTT-SEEEaaaaaaaaxabbx
1iwe_A_461iwe   A4961VVDLLATDADIVSHHHHHHTT-SEEEaaaaaaaaxabbb
1iy9_A_1971iy9   A203215VQRDVKEIFPITKHHHHHHTT-SEEEaaaaaaaababbb
1izo_A_1051izo   A121133AAVTRWEKADEVVHHHHHHTTSSEEEaaaaaaaaxabbb
1l7d_A_2471l7d   A250262AVLKELVKTDIAIHHHHHHTT-SEEEaaaaaaaaxabbb
1ofu_A_1411ofu   A150162GIRALAESVDSLIHHHHHHTT-SEEEaaaaaaaababbx
1pvd_A_1241pvd   A125137FHRMSANISETTAHHHHHGGG-SEEEaaaaaaaababbb
1qjc_A_161qjc   A2133IVTRATQMFDHVIHHHHHHTTSSEEEaaaaaaaababbx
1qpg_*_2181qpg   -220232LIDNLLDKVDSIIHHHHHTTT-SEEEaaaaaaaaxabbb
1rjd_A_2091rjd   A215227LINTIMSKFSHGLHHHHHHHH-SSEEaaaaaaaababbb
1uir_A_2051uir   A209221VHRTVREAFRYVRHHHHHHTT-SEEEaaaaaaaababbb
1vj5_A_1341vj5   A139151LMCELKMHFDFLIHHHHHHTTSSEEEaaaaaaaababbb
1vjd_A_2201vjd   A222234LINNMLDKVNEMIHHHHHTTT-SEEEaaaaaaaaxabbx
2cev_A_1022cev   A105117TLAGVAKHYERLGHHHHHHTT-SSEEaaaaaaaababxx
2dap_*_1232dap   -127139NRVYAAAVLAEHQHHHHHHHH-SSEEaaaaaaaaxabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1iwe_A_461iwe   A     ACTACETATE ION K - 46
1iwe_A_461iwe   A     IMPINOSINIC ACID K - 46
1iwe_A_461iwe   A     ACTACETATE ION G - 47
1izo_A_1051izo   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 111
1ofu_A_1411ofu   A     GDPGUANOSINE-5'-DIPHOSPHATE R - 143
2cev_A_1022cev   A     MNMANGANESE (II) ION W - 120
2dap_*_1232dap   *     API2,6-DIAMINOPIMELIC ACID W - 144

Clusters included in this Subclass
CLUSTER: HE.4.37