Information on SUBCLASS 2.3.4 |
Subclass Accession number: 5366
Subclass: 2.3.4 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 17 Average sequence ID (%) : 12.8 +/- 17.3 Average RMSD (Å) : 0.671 +/- 0.186 Consensus geometry
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Consensus Sequence: | pXhpXh |
(φψ)-conformation: | aababb |
Pattern: | x | x | x | x | x | x | [adeknqst] | x | [afltv] | [adenrst] | x | x | x |
Conservation: | -0.969 | 0.495 | -1.492 | -0.818 | 0.439 | 0.484 | 0.602 | -0.546 | 1.127 | 2.145 | -0.787 | -0.101 | -0.579 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b35_C_106 | 1b35 | C | 106 | 118 | HMGKVANAFTYWR | HHHHHHTT-SEEE | aaaaaaaababbb |
1gdh_A_36 | 1gdh | A | 38 | 50 | EMIETAKSVDALL | HHHHHHTT-SEEE | aaaaaaaababbb |
1hdi_A_220 | 1hdi | A | 222 | 234 | LINNMLDKVNEMI | HHHHHHTT-SEEE | aaaaaaaaxabbx |
1iwe_A_46 | 1iwe | A | 49 | 61 | VVDLLATDADIVS | HHHHHHTT-SEEE | aaaaaaaaxabbb |
1iy9_A_197 | 1iy9 | A | 203 | 215 | VQRDVKEIFPITK | HHHHHHTT-SEEE | aaaaaaaababbb |
1izo_A_105 | 1izo | A | 121 | 133 | AAVTRWEKADEVV | HHHHHHTTSSEEE | aaaaaaaaxabbb |
1l7d_A_247 | 1l7d | A | 250 | 262 | AVLKELVKTDIAI | HHHHHHTT-SEEE | aaaaaaaaxabbb |
1ofu_A_141 | 1ofu | A | 150 | 162 | GIRALAESVDSLI | HHHHHHTT-SEEE | aaaaaaaababbx |
1pvd_A_124 | 1pvd | A | 125 | 137 | FHRMSANISETTA | HHHHHGGG-SEEE | aaaaaaaababbb |
1qjc_A_16 | 1qjc | A | 21 | 33 | IVTRATQMFDHVI | HHHHHHTTSSEEE | aaaaaaaababbx |
1qpg_*_218 | 1qpg | - | 220 | 232 | LIDNLLDKVDSII | HHHHHTTT-SEEE | aaaaaaaaxabbb |
1rjd_A_209 | 1rjd | A | 215 | 227 | LINTIMSKFSHGL | HHHHHHHH-SSEE | aaaaaaaababbb |
1uir_A_205 | 1uir | A | 209 | 221 | VHRTVREAFRYVR | HHHHHHTT-SEEE | aaaaaaaababbb |
1vj5_A_134 | 1vj5 | A | 139 | 151 | LMCELKMHFDFLI | HHHHHHTTSSEEE | aaaaaaaababbb |
1vjd_A_220 | 1vjd | A | 222 | 234 | LINNMLDKVNEMI | HHHHHTTT-SEEE | aaaaaaaaxabbx |
2cev_A_102 | 2cev | A | 105 | 117 | TLAGVAKHYERLG | HHHHHHTT-SSEE | aaaaaaaababxx |
2dap_*_123 | 2dap | - | 127 | 139 | NRVYAAAVLAEHQ | HHHHHHHH-SSEE | aaaaaaaaxabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1iwe_A_46 | 1iwe | A | ACTACETATE ION | K - 46 |
1iwe_A_46 | 1iwe | A | IMPINOSINIC ACID | K - 46 |
1iwe_A_46 | 1iwe | A | ACTACETATE ION | G - 47 |
1izo_A_105 | 1izo | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 111 |
1ofu_A_141 | 1ofu | A | GDPGUANOSINE-5'-DIPHOSPHATE | R - 143 |
2cev_A_102 | 2cev | A | MNMANGANESE (II) ION | W - 120 |
2dap_*_123 | 2dap | * | API2,6-DIAMINOPIMELIC ACID | W - 144 |
Clusters included in this Subclass |
CLUSTER: HE.4.37 |