Information on SUBCLASS 2.5.3 |
Subclass Accession number: 154
Subclass: 2.5.3 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 18.3 +/- 18.6 Average RMSD (Å) : 0.614 +/- 0.135 Consensus geometry
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Consensus Sequence: | phXDXh |
(φψ)-conformation: | aababb |
Pattern: | [AILV] | [AKR] | x | [ALMV] | [degs] | [kqr] | [ilmvy] | [crsy] | [DK] | x | [ITVW] | x | [FILY] |
Conservation: | 0.900 | 0.366 | -0.913 | 0.144 | -0.689 | 0.402 | -0.435 | -0.955 | 2.473 | -1.042 | 0.107 | -0.951 | 0.593 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d2k_A_224 | 1d2k | A | 224 | 236 | LAEMDKYLDFWNL | HHHHHTT-SEEEE | aaaaaaaxabbbx |
1duv_G_89 | 1duv | G | 93 | 105 | ARVLGRMYDGIQY | HHHHTTT-SEEEE | aaaaaaababbbb |
1e4c_P_134 | 1e4c | P | 140 | 152 | VALALKNRKATLL | HHHHTSS-SEEEE | aaaaaaababbxb |
1iz5_A_138 | 1iz5 | A | 145 | 157 | VKAASLVSDSIKF | HHHHTTT-SEEEE | aaaaaaababbxb |
1ml4_A_90 | 1ml4 | A | 94 | 106 | IKTVEQYCDVIVI | HHHHTTT-SEEEE | aaaaaaababbbb |
1plq_*_141 | 1plq | - | 148 | 160 | VRDLSQLSDSINI | HHHHHTT-SEEEE | aaaaaaababbxb |
1rwz_A_135 | 1rwz | A | 142 | 154 | IAAADKISDQVIF | HHHHHTT-SEEEE | aaaaaaababbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1duv_G_89 | 1duv | G | PSQNDELTA-(N'-SULPHODIAMINOPHOSPHINYL)-L-ORNITHINE | R - 106 |
1e4c_P_134 | 1e4c | P | ZNZINC ION | L - 152 |
1ml4_A_90 | 1ml4 | A | PALN-(PHOSPHONACETYL)-L-ASPARTIC ACID | R - 107 |
Clusters included in this Subclass |
CLUSTER: HE.4.54 |