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Information on SUBCLASS 2.5.3
Subclass Accession number: 154
Subclass: 2.5.3 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 18.3 +/- 18.6
Average RMSD (Å) : 0.614 +/- 0.135

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: phXDXh
(φψ)-conformation: aababb
Pattern: [AILV][AKR]x[ALMV][degs][kqr][ilmvy][crsy][DK]x[ITVW]x[FILY]
Conservation:0.9000.366-0.9130.144-0.6890.402-0.435-0.9552.473-1.0420.107-0.9510.593
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d2k_A_2241d2k   A224236LAEMDKYLDFWNLHHHHHTT-SEEEEaaaaaaaxabbbx
1duv_G_891duv   G93105ARVLGRMYDGIQYHHHHTTT-SEEEEaaaaaaababbbb
1e4c_P_1341e4c   P140152VALALKNRKATLLHHHHTSS-SEEEEaaaaaaababbxb
1iz5_A_1381iz5   A145157VKAASLVSDSIKFHHHHTTT-SEEEEaaaaaaababbxb
1ml4_A_901ml4   A94106IKTVEQYCDVIVIHHHHTTT-SEEEEaaaaaaababbbb
1plq_*_1411plq   -148160VRDLSQLSDSINIHHHHHTT-SEEEEaaaaaaababbxb
1rwz_A_1351rwz   A142154IAAADKISDQVIFHHHHHTT-SEEEEaaaaaaababbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1duv_G_891duv   G     PSQNDELTA-(N'-SULPHODIAMINOPHOSPHINYL)-L-ORNITHINE R - 106
1e4c_P_1341e4c   P     ZNZINC ION L - 152
1ml4_A_901ml4   A     PALN-(PHOSPHONACETYL)-L-ASPARTIC ACID R - 107

Clusters included in this Subclass
CLUSTER: HE.4.54