Logo
Information on SUBCLASS 2.9.1
Subclass Accession number: 5443
Subclass: 2.9.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 22.6 +/- 25.0
Average RMSD (Å) : 0.600 +/- 0.220

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXGXXX
(φψ)-conformation: aagabb
Pattern: xxx[aiklt]xx[gk]x[afkltv][hkpqs][cgltv][av]
Conservation:-0.662-0.177-0.276-0.042-0.689-0.1992.614-0.458-0.425-0.403-0.7121.429
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1buc_A_1141buc   A114125LVPLVEGTKLGAHHHHHHTSS-EEaaaaaavabbbb
1e4y_A_1771e4y   A183194SKEAEAGNTKYAHHHHHTTSS-EEaaaaaagabbbb
1jbk_A_2961jbk   A300311KPALARGELHCVHHHHHTTS--EEaaaaaavabbbb
1jon_*_2561jon   -263274VVNTMRGIVKVAHHHHHHTS--EEaaaaaavabbbb
1kid_*_2561kid   -263274VVNTMRGIVKVAHHHHHTTS--EEaaaaaavabbbb
1q9i_A_4321q9i   A433444DKYIGLGVAPTAHHHHHHT---EEaaaaaavabpbb
1rhs_*_1641rhs   -168179LENLESKRFQLVHHHHHH--SEEEaaaaaavabxbb
1srv_A_2561srv   A263274VVNKLRGTLSVAHHHHHTTS--EEaaaaaavabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1buc_A_1141buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 126
1buc_A_1141buc   A     CAAACETOACETYL-COENZYME A F - 126
1buc_A_1141buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 127
1e4y_A_1771e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE D - 197
1q9i_A_4321q9i   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 433
1q9i_A_4321q9i   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 434
1q9i_A_4321q9i   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 435
1q9i_A_4321q9i   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 437
1q9i_A_4321q9i   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 438
1rhs_*_1641rhs   *     CSSS-MERCAPTOCYSTEINE V - 179
1rhs_*_1641rhs   *     CSSS-MERCAPTOCYSTEINE D - 180

Clusters included in this Subclass
CLUSTER: HE.3.216
CLUSTER: HE.4.336
CLUSTER: HE.5.137