Information on SUBCLASS 3.12.1 |
Subclass Accession number: 5539
Subclass: 3.12.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 14 Average sequence ID (%) : 16.9 +/- 19.6 Average RMSD (Å) : 0.800 +/- 0.260 Consensus geometry
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Consensus Sequence: | XpXXXXX |
(φψ)-conformation: | aabppbb |
Pattern: | [ailv] | [EKQRTY] | [adekrs] | [ailmv] | x | [hknqrsw] | [aegkrs] | [DGNPSTV] | [acftv] | x | [afilptv] |
Conservation: | 1.183 | 2.172 | -0.754 | 0.547 | -0.343 | -0.724 | -0.753 | -0.099 | 0.233 | -0.151 | -1.311 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ehw_A_61 | 1ehw | A | 65 | 75 | IRYMSSGPVVA | HHHHTSS-EEE | aaaaaabxbbb |
1fx2_A_1075 | 1fx2 | A | 1075 | 1085 | AEDRKQIDVTA | HHHHHT--EEE | aaaaaabbbbx |
1g0u_A_22 | 1g0u | A | 28 | 38 | LTAVKQGVTSL | HHHHHTS--EE | aaaaaaxxxbb |
1g0u_B_22 | 1g0u | B | 28 | 38 | LESISHAGTAI | HHHHHTS--EE | aaaaaaxpxbb |
1g0u_C_22 | 1g0u | C | 28 | 38 | LEAVKRGTCAV | HHHHHHS--EE | aaaaaaxpxbb |
1g0u_D_22 | 1g0u | D | 28 | 38 | LEAIKLGSTAI | HHHHHTS--EE | aaaaaaxpxbb |
1g0u_E_22 | 1g0u | E | 28 | 38 | LEAIKQGSVTV | HHHHHTS--EE | aaaaaabxxbb |
1g0u_F_22 | 1g0u | F | 28 | 38 | VKAVENGTTSI | HHHHHTS--EE | aaaaaaxpxbb |
1h30_A_601 | 1h30 | A | 611 | 621 | LERHLRSPVLT | HHHHHTS--EE | aaaaaabwbbx |
1hyu_A_202 | 1hyu | A | 204 | 214 | AEALNKRDAYD | HHHHHTS--EE | aaaaaaxxxxa |
1js8_A_2779 | 1js8 | A | 2786 | 2796 | LKEIQHEDRVF | HHHHTTS-EEE | aaaaaabxbbb |
1mg5_A_203 | 1mg5 | A | 204 | 214 | AEKLLAHPTQP | HHHHHTS--EE | aaaaaaxpbbx |
1nhk_L_60 | 1nhk | L | 64 | 74 | VQFMISGPVVL | HHHHTSS-EEE | aaaaaabxbbx |
1qho_A_180 | 1qho | A | 180 | 190 | RYEAQWKNFTD | HHHHHHSB-EE | aaaaaabxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1hyu_A_202 | 1hyu | A | FADFLAVIN-ADENINE DINUCLEOTIDE | V - 218 |
1mg5_A_203 | 1mg5 | A | ACTACETATE ION | L - 207 |
1nhk_L_60 | 1nhk | L | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | L - 63 |
1nhk_L_60 | 1nhk | L | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | M - 67 |
1qho_A_180 | 1qho | A | CACALCIUM ION | A - 183 |
1qho_A_180 | 1qho | A | CACALCIUM ION | Q - 184 |
1qho_A_180 | 1qho | A | CACALCIUM ION | W - 185 |
1qho_A_180 | 1qho | A | CACALCIUM ION | K - 186 |
1qho_A_180 | 1qho | A | ABDACARBOSE DERIVED HEXASACCHARIDE | F - 188 |
1qho_A_180 | 1qho | A | ABDACARBOSE DERIVED HEXASACCHARIDE | T - 189 |
1qho_A_180 | 1qho | A | ABDACARBOSE DERIVED HEXASACCHARIDE | D - 190 |
Clusters included in this Subclass |
CLUSTER: HE.3.57 |
CLUSTER: HE.4.91 |
CLUSTER: HE.5.77 |