Information on SUBCLASS 3.13.1 |
Subclass Accession number: 249
Subclass: 3.13.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 9.4 +/- 10.5 Average RMSD (Å) : 0.600 +/- 0.158 Consensus geometry
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Consensus Sequence: | hpXXXhp |
(φψ)-conformation: | aappgbb |
Pattern: | x | [AKNQ] | [dhrs] | x | [ALVY] | x | [ADSV] | x | x | [ADNQS] | x | [DPR] | x | [ilv] | x | [HILV] |
Conservation: | -1.044 | 0.855 | -0.278 | -0.404 | 0.378 | -0.453 | 0.067 | 0.993 | -1.399 | 0.426 | -1.040 | 2.010 | -1.084 | 1.181 | -1.040 | 0.831 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b7g_O_233 | 1b7g | O | 233 | 248 | KKDILSVLENTPRIVL | HHHHHHHHHT-TTEEE | aaaaaaaaaabpvbbb |
1ez0_A_325 | 1ez0 | A | 331 | 346 | YQSQVVSRGSDDGIDV | HHHHHHHHHTSTTEEE | aaaaaaaaaaxxvbbb |
1f9y_A_14 | 1f9y | A | 18 | 33 | VNAALKALGDIPESHI | HHHHHHHHHTSTTEEE | aaaaaaaaaaxxlbbx |
1lc5_A_263 | 1lc5 | A | 277 | 292 | GARFYQALCQLPLLTV | HHHHHHHHHTSTTEEE | aaaaaaaaaaxxvbbb |
1q5y_A_105 | 1q5y | A | 108 | 123 | VQHFADDVIAQRGVRH | HHHHHHHHHTSTT-EE | aaaaaaaaaaxpgxbl |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ez0_A_325 | 1ez0 | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | I - 327 |
1f9y_A_14 | 1f9y | A | ACTACETATE ION | P - 29 |
1f9y_A_14 | 1f9y | A | ACTACETATE ION | E - 30 |
1f9y_A_14 | 1f9y | A | ACTACETATE ION | S - 31 |
1f9y_A_14 | 1f9y | A | ACTACETATE ION | H - 32 |
Clusters included in this Subclass |
CLUSTER: HE.3.160 |
CLUSTER: HE.5.92 |