Information on SUBCLASS 3.15.1 |
Subclass Accession number: 8373
Subclass: 3.15.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 18.5 +/- 17.4 Average RMSD (Å) : 0.657 +/- 0.151 Consensus geometry
|
Consensus Sequence: | phGpchX |
(φψ)-conformation: | aaeaabb |
Pattern: | x | x | x | [AFKLM] | x | [aqrs] | [ILV] | [ael] | [ADEGKRT] | [ehkq] | [AILY] | [G] | [DEKRS] | [DNS] | [ALV] | [ktv] | [ACFGILP] |
Conservation: | -0.820 | -0.717 | -0.612 | -0.432 | -0.727 | -0.370 | 1.012 | -0.586 | -0.545 | 0.130 | 0.176 | 3.087 | 0.222 | 1.063 | 0.348 | -0.235 | -0.996 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1chd_*_260 | 1chd | - | 261 | 277 | DVLFHSVAKHAGRNAVG | HHHHHHHHHHTGGGEEE | aaaaaaaaaaaeaabbb |
1f0k_A_196 | 1f0k | A | 199 | 215 | NQTMPQVAAKLGDSVTI | HHHHHHHHHHHGGGEEE | aaaaaaaaaaaeaabbb |
1ffv_C_14 | 1ffv | C | 14 | 30 | VGEAVALLGQLGSDAKL | HHHHHHHHHHHGGGEEE | aaaaaaaaaaaeaabbx |
1gpm_A_238 | 1gpm | A | 241 | 257 | SVTAMLLHRAIGKNLTC | HHHHHHHHHHHGGGEEE | aaaaaaaaaaaeaaxbx |
1kny_A_9 | 1kny | A | 17 | 33 | HEIKERILDKYGDDVKA | HHHHHHHHHHHGGGEEE | aaaaaaaaaaaeaaxab |
1n62_C_14 | 1n62 | C | 14 | 30 | IADAVALLTKLGEDARP | HHHHHHHHHHHGGGEEE | aaaaaaaaaaaeaabbx |
1one_A_403 | 1one | A | 409 | 425 | LNQLLRIEEELGDNAVF | HHHHHHHHHHHGGGEEE | aaaaaaaaaaaeaabbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ffv_C_14 | 1ffv | C | FADFLAVIN-ADENINE DINUCLEOTIDE | K - 29 |
1ffv_C_14 | 1ffv | C | FADFLAVIN-ADENINE DINUCLEOTIDE | L - 30 |
1ffv_C_14 | 1ffv | C | FADFLAVIN-ADENINE DINUCLEOTIDE | L - 31 |
1gpm_A_238 | 1gpm | A | POPPYROPHOSPHATE 2- | V - 238 |
1gpm_A_238 | 1gpm | A | POPPYROPHOSPHATE 2- | D - 239 |
1gpm_A_238 | 1gpm | A | AMPADENOSINE MONOPHOSPHATE | D - 239 |
1gpm_A_238 | 1gpm | A | POPPYROPHOSPHATE 2- | S - 240 |
1gpm_A_238 | 1gpm | A | AMPADENOSINE MONOPHOSPHATE | S - 240 |
1gpm_A_238 | 1gpm | A | POPPYROPHOSPHATE 2- | S - 241 |
1gpm_A_238 | 1gpm | A | AMPADENOSINE MONOPHOSPHATE | V - 258 |
1gpm_A_238 | 1gpm | A | AMPADENOSINE MONOPHOSPHATE | F - 259 |
1gpm_A_238 | 1gpm | A | AMPADENOSINE MONOPHOSPHATE | V - 260 |
1gpm_A_238 | 1gpm | A | AMPADENOSINE MONOPHOSPHATE | D - 261 |
1kny_A_9 | 1kny | A | APCDIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER | Y - 37 |
1kny_A_9 | 1kny | A | MGMAGNESIUM ION | Y - 37 |
1n62_C_14 | 1n62 | C | FADFLAVIN-ADENINE DINUCLEOTIDE | R - 29 |
1n62_C_14 | 1n62 | C | FADFLAVIN-ADENINE DINUCLEOTIDE | P - 30 |
Clusters included in this Subclass |
CLUSTER: HE.2.63 |
CLUSTER: HE.3.99 |