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Information on SUBCLASS 3.18.3
Subclass Accession number: 5559
Subclass: 3.18.3 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 14.0 +/- 13.0
Average RMSD (Å) : 0.867 +/- 0.153

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: pXpGphh
(φψ)-conformation: aallabb
Pattern: [ALT]xxx[AV][AEQ]xx[DR][KY]x[KNS][G][KNR][AY][AVW][QTY]xx
Conservation:-0.348-0.841-0.841-0.5120.5430.063-0.676-0.4300.5810.443-0.1390.3103.3510.5570.808-0.512-0.348-1.087-0.923
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c1d_A_921c1d   A99117LRIHAENIDKLSGNYWTGPHHHHHHHHHHTTTSEEEEEaaaaaaaaaaalvabbxbx
1d4x_G_711d4x   G7896AIFTVQLDDYLNGRAVQHRHHHHHHHHHHTTT-EEEEEaaaaaaaaaaalvaxxxbx
1mqi_A_1741mqi   A174192TAEGVARVRKSKGKYAYLLHHHHHHHHHHTTTSEEEEEaaaaaaaaaaalvabbbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1c1d_A_921c1d   A     PHEPHENYLALANINE W - 114
1c1d_A_921c1d   A     PHEPHENYLALANINE T - 115
1c1d_A_921c1d   A     PHEPHENYLALANINE G - 116
1c1d_A_921c1d   A     PHEPHENYLALANINE P - 117
1d4x_G_711d4x   G     CACALCIUM ION E - 73
1mqi_A_1741mqi   A     FWD2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN -1-YL)-PROPIONIC ACID T - 174
1mqi_A_1741mqi   A     FWD2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN -1-YL)-PROPIONIC ACID Y - 190
1mqi_A_1741mqi   A     FWD2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN -1-YL)-PROPIONIC ACID L - 191
1mqi_A_1741mqi   A     FWD2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN -1-YL)-PROPIONIC ACID L - 192
1mqi_A_1741mqi   A     FWD2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN -1-YL)-PROPIONIC ACID E - 193

Clusters included in this Subclass
CLUSTER: HE.5.408