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Information on SUBCLASS 3.2.3
Subclass Accession number: 5460
Subclass: 3.2.3 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 19

Average sequence ID (%) : 13.7 +/- 17.3
Average RMSD (Å) : 0.800 +/- 0.167

Consensus geometry
d (Å): 15 delta (°): 135-180 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXcXphX
(φψ)-conformation: aalbpbb
Pattern: [fhilmvy]x[adekqrst]xx[adgn]x[degknst][acfipvy][kpqrst]xxx
Conservation:0.326-0.5040.326-0.350-0.0862.955-0.5790.625-0.459-0.022-0.819-0.890-0.522
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dtd_A_5721dtd   A586598LSRLHGTKYKVGPHHHHH----EEEEaaaaavxbbbbex
1ek6_A_2771ek6   A284296MEKASGKKIPYKVHHHHH-S---EEEaaaaavbxbwbbx
1gt9_1_391gt9   14557YFASLGVSAPQVVHHHHTT-----EEaaaaavbxxxxbb
1h3f_A_1981h3f   A207219VQRAYGQSPQVCFHHHHTT----EEEaaaaavbxxpxbb
1hc7_A_1681hc7   A186198AREYAAIPVIEGLHHHHH----EEEEaaaaalbwbbxbx
1j09_A_2131j09   A219231LYRAFGWEAPRFYHHHHHT----EEEaaaaavbxxwxbb
1jih_A_2331jih   A252264IKDILGYTTSCGLHHHHH----EEEEaaaaavxxbbbbb
1kwm_A_2161kwm   A230242LASLHGTKYTYGPHHHHH----EEEEaaaaavxbbbbex
1m4l_A_2161m4l   A230242LKSLYGTSYKYGSHHHHH----EEEEaaaaavxxbbbex
1nhp_*_3431nhp   -345357MAQKLGKETKAVTHHHHHT---EEEEaaaaavbxbbbbb
1nmo_A_1391nmo   A146157IEARLGRKPLWC.HHHHHTS--EEE.aaaaavbxxxbb.
1nsa_*_2161nsa   -230242LASLYGTSYSYGPHHHHH----EEEEaaaaavpxbbbex
1nzj_A_1951nzj   A204216LYQLFGWKVPDYIHHHHHT----EEEaaaaavbxxwxbb
1p5h_A_1691p5h   A186198MRHKTGRGQKVAVHHHHHS---EEEEaaaaavbxbxbbb
1pze_A_581pze   A6981VTSVVDTNVSVRAHHHHHT----EEEaaaaavbbbxbbx
1q7e_A_1781q7e   A188198HREKTGRGQRV..HHHHHS---EE..aaaaavbxbxb..
1qlt_A_4331qlt   A446458RCQEAGLDFIGTFHHHHTT----EEEaaaaavbxxbbbb
1qu9_A_841qu9   A94105FFTEHNATFPAR.HHHHTT----EE.aaaaalbxxwxb.
1t2d_A_501t2d   A5062TNVMAYSNCKVSGHHHHHT----EEEaaaaalbbbxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ek6_A_2771ek6   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE V - 277
1ek6_A_2771ek6   A     MGMAGNESIUM ION E - 285
1ek6_A_2771ek6   A     MGMAGNESIUM ION K - 291
1h3f_A_1981h3f   A     TYBTYROSINAL N - 200
1j09_A_2131j09   A     GLUGLUTAMIC ACID H - 216
1nmo_A_1391nmo   A     MSESELENOMETHIONINE E - 141
1q7e_A_1781q7e   A     MSESELENOMETHIONINE L - 178
1q7e_A_1781q7e   A     MSESELENOMETHIONINE L - 179
1q7e_A_1781q7e   A     MSESELENOMETHIONINE I - 180
1q7e_A_1781q7e   A     MSESELENOMETHIONINE G - 181
1q7e_A_1781q7e   A     MSESELENOMETHIONINE V - 198
1qu9_A_841qu9   A     CSPS-PHOSPHOCYSTEINE F - 84
1qu9_A_841qu9   A     CSPS-PHOSPHOCYSTEINE N - 88
1qu9_A_841qu9   A     CSPS-PHOSPHOCYSTEINE R - 105
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h3f_A_1981h3f   A AC6TYB BINDING SITE FOR CHAIN AN - 200

Clusters included in this Subclass
CLUSTER: HE.4.86
CLUSTER: HE.5.31
CLUSTER: HE.6.100
CLUSTER: HE.6.64
CLUSTER: HE.7.79