Information on SUBCLASS 3.2.6 |
Subclass Accession number: 5463
Subclass: 3.2.6 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 11 Average sequence ID (%) : 15.0 +/- 14.9 Average RMSD (Å) : 0.791 +/- 0.226 Consensus geometry
|
Consensus Sequence: | XpGXXhX |
(φψ)-conformation: | aalbpbb |
Pattern: | x | x | [adert] | [ALWY] | x | [adekqr] | [dehknqst] | [GK] | x | [DEHPST] | [ilmv] | [afkltv] | x |
Conservation: | -0.050 | -0.928 | -0.435 | 0.295 | -0.240 | -0.308 | -0.170 | 2.931 | -1.225 | 0.245 | 0.536 | -0.446 | -0.205 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1an1_I_24 | 1an1 | I | 24 | 36 | SCIARCNGVSIKS | HHHHHTTT--EEE | aaaaaaalbxxab |
1cbf_*_170 | 1cbf | - | 170 | 182 | LTDLAKHKCTIAL | HHHHHTT-SEEEE | aaaaaaalbxbbx |
1efv_A_36 | 1efv | A | 41 | 53 | ITAATRLGGEVSC | HHHHHTTTSEEEE | aaaaaaavbxbbb |
1eye_A_196 | 1eye | A | 196 | 208 | LPELVATGIPVLV | HHHHHTTSS-BEE | aaaaaaavbpbbb |
1j6u_A_89 | 1j6u | A | 94 | 106 | RDTLKREKKEEFA | HHHHHHH---EEE | aaaaaaalbxbbb |
1j7j_A_11 | 1j7j | A | 26 | 38 | TERYKDSGSEMVL | HHHHHTT-S-EEE | aaaaaaagxxbbx |
1jj2_M_20 | 1jj2 | M | 23 | 35 | RLRLLKSGKPRLV | HHHHHHT-S-EEE | aaaaaaavbxxxx |
1l5j_A_220 | 1l5j | A | 223 | 235 | IEALQQKGFPLAY | HHHHHTTSS-EEE | aaaaaaavbxxbx |
1ns5_A_81 | 1ns5 | A | 88 | 100 | LERWKLDGRDVSL | HHHHHHH-S-EEE | aaaaaaagxpbbb |
1pzx_A_45 | 1pzx | A | 48 | 60 | VYDAMRQGHTVKT | HHHHHTTT---EE | aaaaaaavbbxbb |
2fok_A_160 | 2fok | A | 165 | 176 | ILTLLEDGQHLT. | HHHHHTT---EE. | aaaaaaavpbbx. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cbf_*_170 | 1cbf | * | SAHS-ADENOSYL-L-HOMOCYSTEINE | L - 182 |
1cbf_*_170 | 1cbf | * | SAHS-ADENOSYL-L-HOMOCYSTEINE | F - 183 |
1eye_A_196 | 1eye | A | PMMPTERIN-6-YL-METHYL-MONOPHOSPHATE | L - 207 |
1eye_A_196 | 1eye | A | PMMPTERIN-6-YL-METHYL-MONOPHOSPHATE | V - 208 |
1j6u_A_89 | 1j6u | A | MSESELENOMETHIONINE | R - 89 |
1j6u_A_89 | 1j6u | A | MSESELENOMETHIONINE | Y - 92 |
1j7j_A_11 | 1j7j | A | MGMAGNESIUM ION | L - 41 |
1ns5_A_81 | 1ns5 | A | MSESELENOMETHIONINE | L - 88 |
1ns5_A_81 | 1ns5 | A | MSESELENOMETHIONINE | W - 91 |
1ns5_A_81 | 1ns5 | A | MSESELENOMETHIONINE | K - 92 |
1ns5_A_81 | 1ns5 | A | MSESELENOMETHIONINE | G - 95 |
1ns5_A_81 | 1ns5 | A | MSESELENOMETHIONINE | R - 96 |
1ns5_A_81 | 1ns5 | A | MSESELENOMETHIONINE | D - 97 |
1ns5_A_81 | 1ns5 | A | MSESELENOMETHIONINE | V - 98 |
1ns5_A_81 | 1ns5 | A | MSESELENOMETHIONINE | L - 101 |
1ns5_A_81 | 1ns5 | A | MSESELENOMETHIONINE | I - 102 |
1pzx_A_45 | 1pzx | A | PLMPALMITIC ACID | T - 60 |
1pzx_A_45 | 1pzx | A | PLMPALMITIC ACID | A - 61 |
Clusters included in this Subclass |
CLUSTER: HE.3.113 |
CLUSTER: HE.4.136 |
CLUSTER: HE.5.219 |
CLUSTER: HE.6.172 |