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Information on SUBCLASS 3.2.7
Subclass Accession number: 199
Subclass: 3.2.7 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 10.5 +/- 13.0
Average RMSD (Å) : 0.757 +/- 0.355

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XhXhXXX
(φψ)-conformation: aalppbb
Pattern: [alm]x[agklv][AEGQS][ailw][aekst][acik][gly][DEGN][gilv][ADNP][gitv][aeknr][aimpv]
Conservation:0.770-1.615-1.3560.917-0.696-0.129-0.088-0.5572.000-0.2621.4580.018-0.263-0.198
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ig8_A_1881ig8   A192205LQKQITKRNIPIEVHHHHHHHTT--EEEaaaaaaaavxxbbx
1iib_A_131iib   A2336MRAQAEKYEVPVIIHHHHHHHTT--EEEaaaaaaaalxxbbb
1j0a_A_1931j0a   A198211LSLGLSILNEDIRPHHHHHHHTT---EEaaaaaaaalxxbxw
1k20_A_141k20   A2437AYLAREAYGLDTEAHHHHHHHH---EEEaaaaaaaavxxxbx
1lam_*_2751lam   -283296AIVSAAKLDLPINIHHHHHHHTT-SSEEaaaaaaaalxwbxb
1qgi_A_961qgi   A96109ADGALKRLGINGKMHHHHHHHTT--EEEaaaaaaaavxxbbx
1vsr_A_1271vsr   A133146RLEEWICGEGASAQHHHHHHHTT--SEEaaaaaaaalxxpbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j0a_A_1931j0a   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 193
1j0a_A_1931j0a   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 194
1j0a_A_1931j0a   A     PLPPYRIDOXAL-5'-PHOSPHATE L - 195
1k20_A_141k20   A     MNMANGANESE (II) ION S - 14
1k20_A_141k20   A     MNMANGANESE (II) ION D - 15
1k20_A_141k20   A     MNMANGANESE (II) ION A - 16
1lam_*_2751lam   *     MPD2-METHYL-2,4-PENTANEDIOL N - 295
1lam_*_2751lam   *     MPD2-METHYL-2,4-PENTANEDIOL I - 296
1lam_*_2751lam   *     MPD2-METHYL-2,4-PENTANEDIOL V - 297
1lam_*_2751lam   *     ZNZINC ION N - 305
1vsr_A_1271vsr   A     ZNZINC ION D - 148

Clusters included in this Subclass
CLUSTER: HE.3.91
CLUSTER: HE.4.82
CLUSTER: HE.5.48