Information on SUBCLASS 3.31.1 |
Subclass Accession number: 5576
Subclass: 3.31.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.1 (>50 %) 1.1 (>75 %) 1.1.1 (>50 %) 1.1.1 (>75 %) 1.1.1.205 GO : GO:0004457 (>50 %) GO:0004459 (>50 %) GO:0016614 (>50 %) GO:0016616 (>50 %) SCOP : 51412 (>75 %) 51413 (>75 %) 51734 (>50 %) 51735 (>50 %) 51848 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 25.9 +/- 18.7 Average RMSD (Å) : 0.500 +/- 0.265 Consensus geometry
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Consensus Sequence: | XXXLGXh |
(φψ)-conformation: | aalaepb |
Pattern: | [AGS] | [DTV] | [MTV] | [AI] | [HKT] | [LTW] | [ILY] | [AV] | [AQR] | [KL] | [EGN] | [L] | [G] | [DV] | [GIV] | [V] | [IL] | [AFL] |
Conservation: | -0.169 | -0.888 | -0.329 | -0.264 | -0.648 | -0.648 | -0.249 | 0.111 | -0.489 | -0.325 | -0.409 | 1.427 | 2.864 | -0.387 | -0.968 | 1.427 | 0.751 | -0.808 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1al3_*_227 | 1al3 | - | 227 | 244 | ADVIKTYVRLGLGVGVIA | HHHHHHHHHHTS-EEEEE | aaaaaaaaaavaexxbbp |
1t2d_A_13 | 1t2d | A | 16 | 33 | GVMATLIVQKNLGDVVLF | HHHHHHHHHTT--EEEEE | aaaaaaaaaalaexbbxx |
1ur5_A_12 | 1ur5 | A | 15 | 32 | STTAHWLAAKELGDIVLL | HHHHHHHHHTT-SEEEEE | aaaaaaaaaalaexbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1t2d_A_13 | 1t2d | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | M - 13 |
1t2d_A_13 | 1t2d | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | I - 14 |
1t2d_A_13 | 1t2d | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | G - 15 |
1t2d_A_13 | 1t2d | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | F - 33 |
1ur5_A_12 | 1ur5 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | F - 12 |
1ur5_A_12 | 1ur5 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 13 |
1ur5_A_12 | 1ur5 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | G - 14 |
1ur5_A_12 | 1ur5 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | L - 32 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ur5_A_12 | 1ur5 | A | BC2NA BINDING SITE FOR CHAIN A | H - 19 |
Clusters included in this Subclass |
CLUSTER: HE.4.294 |