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Information on SUBCLASS 3.4.2
Subclass Accession number: 211
Subclass: 3.4.2 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 16

Average sequence ID (%) : 11.8 +/- 14.6
Average RMSD (Å) : 0.769 +/- 0.221

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXXXXhp
(φψ)-conformation: aabaabb
Pattern: [aekqrt][aeknrs][afgil][afgilm][adegkns]x[adenqst][DEKPQST][dekqrstw][AFILMVY][adeknqrst][flmvy]
Conservation:-0.4330.488-1.4820.007-0.579-0.365-0.3931.172-0.9871.975-0.5181.114
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8l_*_381a8l   -4657QELSELTDKLSYHHHHTT-TTEEEaaaaaabaabbb
1c3p_A_1731c3p   A176187QEAFYDTDQVFVHHHHTT-SSEEEaaaaaabaabbb
1din_*_1761din   -183194TEGFGANPLLQVHHHHTT-TTEEEaaaaaabaaxbb
1dpe_*_2451dpe   -245256IARMKQDKSINLHHHHHH-TTEEEaaaaaaxaabxx
1gc0_A_3211gc0   A326337RRFMNALQLFSRHHHHHH-SSSEEaaaaaapaaxxx
1gca_*_151gca   -2536EKDGKSAPDVQLHHHHHTSTTEEEaaaaaabaabbx
1gud_A_1461gud   A156167TEAFKKASQIKLHHHHHT-TTEEEaaaaaabaaxbx
1hyu_A_311hyu   A4152AEIAELSDKVTFHHHHTT-TTEEEaaaaaabaabbb
1i8t_A_3161i8t   A326337RELASREDKVIFHHHHHH-TTEEEaaaaaaxaabbx
1jwq_A_261jwq   A3849ESILKQNPKLEVHHHHHT-TTEEEaaaaaaxaabbx
1jyh_A_1071jyh   A114125FNSLLQDSAYEMHHHHTT-SSEEEaaaaaaxaabbx
1lk9_A_3141lk9   A330341TALLDQSDRFSYHHHHTT-SSEEEaaaaaabaabbb
1mqi_A_1241mqi   A124135AEDLSKQTEIAYHHHHHT-SSSEEaaaaaabaaxxb
1nwc_A_2911nwc   A296307QIIASHNEWVKVHHHHHS-SSEEEaaaaaabaaxbx
1q0r_A_2551q0r   A257268KHLAGLIPTARLHHHHHTSTTEEEaaaaaabaaxbb
2dap_*_132dap   -1930EKLIAKQPDMDLHHHHTT-TTEEEaaaaaaxaabbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gca_*_151gca   *     GALD-GALACTOSE N - 15
1gca_*_151gca   *     CACALCIUM ION N - 15
1gca_*_151gca   *     GALD-GALACTOSE F - 16
1gca_*_151gca   *     CACALCIUM ION F - 16
1gca_*_151gca   *     GALD-GALACTOSE M - 17
1gca_*_151gca   *     CACALCIUM ION M - 17
1gca_*_151gca   *     GALD-GALACTOSE S - 18
1gca_*_151gca   *     CACALCIUM ION S - 18
1gud_A_1461gud   A     ZNZINC ION E - 157
1gud_A_1461gud   A     ZNZINC ION K - 160
1jwq_A_261jwq   A     ZNZINC ION E - 26
1jwq_A_261jwq   A     ZNZINC ION N - 30
1lk9_A_3141lk9   A     NAGN-ACETYL-D-GLUCOSAMINE K - 321
1lk9_A_3141lk9   A     NAGN-ACETYL-D-GLUCOSAMINE E - 324
1lk9_A_3141lk9   A     NAGN-ACETYL-D-GLUCOSAMINE R - 325
1lk9_A_3141lk9   A     NAGN-ACETYL-D-GLUCOSAMINE N - 328
1q0r_A_2551q0r   A     AKT10-DECARBOXYMETHYLACLACINOMYCIN T (DCMAT) H - 255
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gud_A_1461gud   A ZN2ZN BINDING SITE FOR CHAIN AE - 157

Clusters included in this Subclass
CLUSTER: HE.3.105
CLUSTER: HE.4.150
CLUSTER: HE.4.37
CLUSTER: HE.5.14
CLUSTER: HE.6.24