Information on SUBCLASS 3.5.6 |
Subclass Accession number: 5506
Subclass: 3.5.6 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 17.7 +/- 24.3 Average RMSD (Å) : 0.820 +/- 0.130 Consensus geometry
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Consensus Sequence: | XpXhXhh |
(φψ)-conformation: | aalppbb |
Pattern: | [ILV] | [DEKPQ] | x | x | [kv] | [AEGQ] | [HKTY] | [EGNS] | [AFIY] | [EP] | [ILV] | [AFIL] | x |
Conservation: | 1.200 | -0.051 | -1.184 | -0.748 | -0.166 | -0.459 | -0.467 | 0.011 | -0.317 | 2.243 | 1.312 | -0.275 | -1.101 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ad1_A_186 | 1ad1 | A | 186 | 198 | LDELVATEYPVLL | HHHHHTT-S-BEE | aaaaaaavxwbbb |
1eye_A_196 | 1eye | A | 196 | 208 | LPELVATGIPVLV | HHHHHTTSS-BEE | aaaaaaavbpbbb |
1ii7_A_58 | 1ii7 | A | 68 | 80 | LQIPKEHSIPVFA | HHHHHTTT--EEE | aaaaaaavxxbbb |
1l5j_A_220 | 1l5j | A | 223 | 235 | IEALQQKGFPLAY | HHHHHTTSS-EEE | aaaaaaavbxxbx |
1lrz_A_377 | 1lrz | A | 380 | 392 | VKFKKGYNAEIIE | HHHHHTTT-EEEE | aaaaaaavxbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1eye_A_196 | 1eye | A | PMMPTERIN-6-YL-METHYL-MONOPHOSPHATE | L - 207 |
1eye_A_196 | 1eye | A | PMMPTERIN-6-YL-METHYL-MONOPHOSPHATE | V - 208 |
Clusters included in this Subclass |
CLUSTER: HE.5.110 |