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Information on SUBCLASS 3.5.6
Subclass Accession number: 5506
Subclass: 3.5.6 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 17.7 +/- 24.3
Average RMSD (Å) : 0.820 +/- 0.130

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XpXhXhh
(φψ)-conformation: aalppbb
Pattern: [ILV][DEKPQ]xx[kv][AEGQ][HKTY][EGNS][AFIY][EP][ILV][AFIL]x
Conservation:1.200-0.051-1.184-0.748-0.166-0.459-0.4670.011-0.3172.2431.312-0.275-1.101
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ad1_A_1861ad1   A186198LDELVATEYPVLLHHHHHTT-S-BEEaaaaaaavxwbbb
1eye_A_1961eye   A196208LPELVATGIPVLVHHHHHTTSS-BEEaaaaaaavbpbbb
1ii7_A_581ii7   A6880LQIPKEHSIPVFAHHHHHTTT--EEEaaaaaaavxxbbb
1l5j_A_2201l5j   A223235IEALQQKGFPLAYHHHHHTTSS-EEEaaaaaaavbxxbx
1lrz_A_3771lrz   A380392VKFKKGYNAEIIEHHHHHTTT-EEEEaaaaaaavxbxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eye_A_1961eye   A     PMMPTERIN-6-YL-METHYL-MONOPHOSPHATE L - 207
1eye_A_1961eye   A     PMMPTERIN-6-YL-METHYL-MONOPHOSPHATE V - 208

Clusters included in this Subclass
CLUSTER: HE.5.110