Logo
Information on SUBCLASS 4.1.4
Subclass Accession number: 269
Subclass: 4.1.4 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 13.2 +/- 13.5
Average RMSD (Å) : 1.160 +/- 0.305

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XppXXhph
(φψ)-conformation: aabaapbb
Pattern: [aenr][EGS][AFLMV][AGKV]x[him][CKLV][ehnq][ADG]x[adq][aks][hqty]x[EPR]x[AFIY][krs][LPV]
Conservation:-0.1790.9350.061-0.7030.983-0.708-0.559-0.6611.008-1.153-1.571-0.473-0.822-0.1682.575-0.0661.139-0.3850.747
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1hwl_A_6121hwl   A613631EGFAVIKEAFDSTSRFARLHHHHHHHHHHHTT-SS-EEaaaaaaaaaaaaabaaxbp
1itz_A_4231itz   A424442HGMGAICNGIALHSPGFVPHHHHHHHHHHHTT-TT-EEaaaaaaaaaaaaabaaxbx
1jy1_A_2321jy1   A232250REAKAHLHAQAKPYENISLHHHHHHHHHHHTT-TTEEEeaaaaaaaaaaaabaabbb
1nvm_B_2201nvm   B225243ASVAEMVQAVQAYVPGYRLHHHHHHHHHHHTT-TTEEEaaaaaaaaaaaaabaaxbx
3tgl_*_1093tgl   -120138NELVATVLDQFKQYPSYKVHHHHHHHHHHHHH-TTSEEaaaaaaaaaaaaabaaxxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1itz_A_4231itz   A     TPPTHIAMINE DIPHOSPHATE E - 423
1itz_A_4231itz   A     TPPTHIAMINE DIPHOSPHATE T - 446
1itz_A_4231itz   A     TPPTHIAMINE DIPHOSPHATE F - 447

Clusters included in this Subclass
CLUSTER: HE.5.89