Information on SUBCLASS 4.1.8 |
Subclass Accession number: 5594
Subclass: 4.1.8 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.1 (>75 %) 1.1.1 (>75 %) 1.1.1.37 (>75 %) GO : GO:0004457 (>75 %) GO:0004459 (>75 %) GO:0016614 (>75 %) GO:0016615 (>75 %) GO:0016616 (>75 %) GO:0030060 (>75 %) SCOP : 51734 (>75 %) 51735 (>75 %) 51848 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 28.2 +/- 28.7 Average RMSD (Å) : 0.625 +/- 0.126 Consensus geometry
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Consensus Sequence: | XXXXphXh |
(φψ)-conformation: | aabaapbb |
Pattern: | [IT] | [DGPS] | x | [AI] | [AMV] | [EKP] | [HLV] | x | [KP] | [EN] | [AP] | [ITV] | [IY] |
Conservation: | 0.017 | -1.173 | -1.574 | 0.167 | -0.301 | 0.178 | -1.309 | -0.476 | 1.318 | 1.948 | 0.464 | 0.239 | 0.500 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gv0_A_92 | 1gv0 | A | 102 | 114 | TGRIMEHSKNPII | HHHHTTT-SS-EE | aaaaaaabaaxbx |
1gv1_A_87 | 1gv1 | A | 102 | 114 | TDNIMKHSKNPII | HHHHTTT-SS-EE | aaaaaaabaaxbb |
1kyh_A_67 | 1kyh | A | 67 | 79 | IPLIVPVLPEATY | HHHHTTT-TT-EE | aaaaaaabaaxbb |
1ur5_A_90 | 1ur5 | A | 103 | 115 | ISQAAPLSPNAVI | HHHHGGG-TT-EE | aaaaaaabaaxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gv0_A_92 | 1gv0 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | N - 94 |
1gv0_A_92 | 1gv0 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | I - 97 |
1gv0_A_92 | 1gv0 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | E - 100 |
1gv0_A_92 | 1gv0 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 101 |
1gv0_A_92 | 1gv0 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 116 |
1kyh_A_67 | 1kyh | A | MSESELENOMETHIONINE | L - 74 |
1kyh_A_67 | 1kyh | A | MSESELENOMETHIONINE | E - 76 |
1kyh_A_67 | 1kyh | A | MSESELENOMETHIONINE | A - 77 |
1kyh_A_67 | 1kyh | A | MSESELENOMETHIONINE | T - 78 |
1ur5_A_90 | 1ur5 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | N - 95 |
1ur5_A_90 | 1ur5 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | I - 98 |
1ur5_A_90 | 1ur5 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | A - 101 |
1ur5_A_90 | 1ur5 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | C - 102 |
1ur5_A_90 | 1ur5 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | Q - 105 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gv0_A_92 | 1gv0 | A | NAANAD BINDING SITE FOR CHAIN A | N - 94 |
1gv0_A_92 | 1gv0 | A | NAANAD BINDING SITE FOR CHAIN A | I - 97 |
1gv0_A_92 | 1gv0 | A | NAANAD BINDING SITE FOR CHAIN A | E - 100 |
Clusters included in this Subclass |
CLUSTER: HE.7.66 |