Information on SUBCLASS 4.2.6 |
Subclass Accession number: 5602
Subclass: 4.2.6 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 13.9 +/- 13.3 Average RMSD (Å) : 0.667 +/- 0.153 Consensus geometry
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Consensus Sequence: | XpGXXpXh |
(φψ)-conformation: | aalababb |
Pattern: | [AGM] | [CFM] | [AKR] | [NRT] | [G] | x | [ILT] | [KR] | x | [ILP] | [AMY] | [GI] |
Conservation: | -0.556 | -0.071 | -0.071 | -0.071 | 2.701 | -0.625 | -0.140 | 1.228 | -0.694 | -0.556 | -0.487 | -0.659 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1li4_A_158 | 1li4 | A | 167 | 178 | MMANGILKVPAI | HHHTT---SEEE | aaaavapabxbb |
1n62_B_456 | 1n62 | B | 469 | 480 | AFKRGETREIMG | HHHTTS-SEEEE | aaaavabaxbbb |
1oyw_A_110 | 1oyw | A | 110 | 121 | GCRTGQIRLLYI | HHHHT--SEEEE | aaaavababbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1li4_A_158 | 1li4 | A | NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE | T - 158 |
1li4_A_158 | 1li4 | A | NOC3-(6-AMINO-PURIN-9-YL)-5-HYDROXYMETHYL-CYCLOPENTANE-1, 2-DIOL | T - 158 |
1li4_A_158 | 1li4 | A | NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE | T - 159 |
1li4_A_158 | 1li4 | A | NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE | G - 160 |
1li4_A_158 | 1li4 | A | NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE | H - 162 |
1oyw_A_110 | 1oyw | A | MSESELENOMETHIONINE | G - 110 |
1oyw_A_110 | 1oyw | A | MSESELENOMETHIONINE | C - 111 |
1oyw_A_110 | 1oyw | A | MSESELENOMETHIONINE | R - 112 |
1oyw_A_110 | 1oyw | A | MSESELENOMETHIONINE | T - 113 |
1oyw_A_110 | 1oyw | A | MSESELENOMETHIONINE | G - 114 |
1oyw_A_110 | 1oyw | A | MSESELENOMETHIONINE | Q - 115 |
1oyw_A_110 | 1oyw | A | MSESELENOMETHIONINE | I - 116 |
1oyw_A_110 | 1oyw | A | MSESELENOMETHIONINE | Y - 120 |
1oyw_A_110 | 1oyw | A | MSESELENOMETHIONINE | I - 121 |
Clusters included in this Subclass |
CLUSTER: HE.5.284 |