Information on SUBCLASS 5.10.1 |
Subclass Accession number: 8582
Subclass: 5.10.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 52.6 +/- 26.2 Average RMSD (Å) : 0.222 +/- 0.083 Consensus geometry
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Consensus Sequence: | hXpXDhcGF |
(φψ)-conformation: | aapaabaeb |
Pattern: | [ACI] | [AKNRS] | [DEST] | [FL] | [AFILY] | [AKQS] | [KMQ] | [ehpqr] | [DQ] | [IV] | [DN] | [G] | [AF] | [L] | [V] |
Conservation: | -0.455 | -1.069 | -0.742 | -0.014 | -1.191 | -0.929 | -0.275 | -1.358 | 0.586 | 0.620 | 0.754 | 2.209 | 0.009 | 0.928 | 0.928 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hti_A_217 | 1hti | A | 217 | 231 | CKELASQPDVDGFLV | HHHHHTSTT--EEEE | aaaaaapaabaebbx |
1kv5_A_219 | 1kv5 | A | 219 | 233 | ARTLYQQRDVNGFLV | HHHHHTSTT--EEEE | aaaaaaxaaxaebbb |
1lyx_A_217 | 1lyx | A | 217 | 231 | CSSLIQQEDIDGFLV | HHHHHTSTT--EEEE | aaaaaaxaabaebbb |
1m6j_A_226 | 1m6j | A | 226 | 240 | CNELAKKADIDGFLV | HHHHHTSTT--EEEE | aaaaaaxaabaebbx |
1n55_A_219 | 1n55 | A | 219 | 233 | AATLYAKPDINGFLV | HHHHHTSTT--EEEE | aaaaaaxaabaebbb |
1tcd_A_220 | 1tcd | A | 220 | 234 | ARTLYQMRDINGFLV | HHHHHTSTT--EEEE | aaaaaaxaabaebbb |
1tmh_A_217 | 1tmh | A | 220 | 234 | AAELFAQHDVDGFLV | HHHHHTSSS--EEEE | aaaaaaxaaxaebbx |
1tph_1_217 | 1tph | 1 | 217 | 231 | CKELASQHDVDGFLV | HHHHHTSTT--EEEE | aaaaaaxaaxaebbb |
2btm_A_218 | 2btm | A | 218 | 232 | IRDFLAQQQIDGALV | HHHHHTSTT--EEEE | aaaaaapaabaebbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kv5_A_219 | 1kv5 | A | PGA2-PHOSPHOGLYCOLIC ACID | L - 232 |
1kv5_A_219 | 1kv5 | A | PGA2-PHOSPHOGLYCOLIC ACID | V - 233 |
1lyx_A_217 | 1lyx | A | PGA2-PHOSPHOGLYCOLIC ACID | L - 230 |
1lyx_A_217 | 1lyx | A | PGA2-PHOSPHOGLYCOLIC ACID | V - 231 |
1tph_1_217 | 1tph | 1 | PGHPHOSPHOGLYCOLOHYDROXAMIC ACID | L - 230 |
1tph_1_217 | 1tph | 1 | PGHPHOSPHOGLYCOLOHYDROXAMIC ACID | V - 231 |
2btm_A_218 | 2btm | A | PGA2-PHOSPHOGLYCOLIC ACID | L - 231 |
2btm_A_218 | 2btm | A | PGA2-PHOSPHOGLYCOLIC ACID | V - 232 |
Clusters included in this Subclass |
CLUSTER: HE.5.69 |