Information on SUBCLASS 5.12.1 |
Subclass Accession number: 5778
Subclass: 5.12.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 17 Average sequence ID (%) : 42.4 +/- 26.5 Average RMSD (Å) : 0.435 +/- 0.184 Consensus geometry
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Consensus Sequence: | pXCPXXhhp |
(φψ)-conformation: | aapaalabb |
Pattern: | [AC] | [afimv] | [adegknst] | [agstv] | [C] | [P] | [anstv] | [ADEGNQS] | [acl] | [FIMP] | x |
Conservation: | 0.685 | -0.499 | -0.800 | -0.585 | 2.138 | 1.511 | -0.636 | -0.440 | -0.202 | -0.346 | -0.826 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1blu_*_48 | 1blu | - | 49 | 59 | CVEVCPVDCII | HHHH-TT--EE | aaaaxaalabb |
1dur_A_41 | 1dur | A | 42 | 52 | CASVCPVGAPN | HHHH-TT--EE | aaaaxaalaxb |
1fxd_*_41 | 1fxd | - | 46 | 56 | AIDSCPAEAIV | HHHH-TT--EE | aaaaxaalaxb |
1fxr_A_44 | 1fxr | A | 50 | 60 | AMDTCPVQCIH | HHHH-TT--EE | aaaapaalabb |
1h0h_B_151 | 1h0h | B | 152 | 162 | CVTSCPTGAMN | HHHH-SSS-EE | aaaaxaavaxb |
1h98_A_15 | 1h98 | A | 16 | 26 | CVEVCPVECIY | HHHH-TT--EE | aaaaxaalabb |
1h98_A_45 | 1h98 | A | 45 | 55 | CVPACPVNAIY | HHHH-TT--EE | aaaaxaalaxb |
1iqz_A_51 | 1iqz | A | 57 | 67 | AFEGCPTDSIK | HHHH-TT--EE | aaaaxaalaxb |
1jnr_B_20 | 1jnr | B | 21 | 31 | CEYICPNDLMT | HHHH-TTS-EE | aaaapaalaxb |
1jnr_B_52 | 1jnr | B | 53 | 63 | CVKMCPQGAID | HHHH-TT--EE | aaaaxaalabb |
1kek_A_694 | 1kek | A | 695 | 705 | CAFVCPHSAIL | HHHH-TT--EE | aaaaxaavabb |
1kqf_B_174 | 1kqf | B | 175 | 185 | CVKTCPTGAIH | HHHH-TTS-EE | aaaapaavaxb |
1q16_B_191 | 1q16 | B | 192 | 202 | CVATCPSGAIY | HHHT-TT--EE | aaaaxaavaxb |
1vjw_*_43 | 1vjw | - | 47 | 57 | AADSCPTGAIS | HHHH-TT--EE | aaaaxaavaxb |
1xer_*_88 | 1xer | - | 89 | 99 | CVNVCPVAAID | HHHH-TT--EE | aaaaxaalabb |
2fdn_*_42 | 2fdn | - | 43 | 53 | CAGVCPVDAPV | HHHT-TT--EE | aaaaxaalawb |
7fd1_A_15 | 7fd1 | A | 16 | 26 | CVEVCPVDCFY | HHHH-TT--EE | aaaaxaalaxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.4.32 |
CLUSTER: HE.5.48 |
CLUSTER: HE.6.25 |
CLUSTER: HE.6.88 |