Information on SUBCLASS 5.27.1 |
Subclass Accession number: 388
Subclass: 5.27.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.7 (>50 %) 2.7 (>75 %) 2.7.2 (>50 %) 2.7.2.32.7.3 (>75 %) 2.7.3.2 GO : GO:0004111 (>75 %) GO:0004618 (>75 %) GO:0016301 (>75 %) GO:0016301 (>75 %) GO:0016772 (>75 %) GO:0016772 (>75 %) GO:0016774 (>75 %) GO:0016775 (>75 %) SCOP : 53747 (>75 %) 53748 (>75 %) 53749 (>75 %) 55930 (>75 %) 55931 (>75 %) 55935 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 7.0 +/- 8.0 Average RMSD (Å) : 0.633 +/- 0.153 Consensus geometry
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Consensus Sequence: | XXchXXhXX |
(φψ)-conformation: | aalbppwpb |
Pattern: | x | [APQ] | x | [HLY] | x | x | [FL] | [FTY] | [RST] | [AE] | x | [GN] | [ALW] | [AET] | x | [PV] | [ANR] | x | x |
Conservation: | -0.756 | -0.365 | -1.016 | 0.286 | -0.365 | -1.016 | 1.974 | 0.416 | -0.105 | 0.525 | 0.155 | 2.207 | -0.756 | -0.365 | -0.626 | 1.451 | -0.496 | -1.147 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ga6_A_39 | 1ga6 | A | 42 | 60 | LQDLQQFTSANGLASVNTQ | HHHHHHHHHHTT-----EE | aaaaaaaaaaavxpxxxbb |
1j09_A_213 | 1j09 | A | 213 | 231 | TPIHVLLYRAFGWEAPRFY | HHHHHHHHHHHT----EEE | aaaaaaaaaaavbxxwxbb |
1qu9_A_84 | 1qu9 | A | 88 | 105 | NATYEAFFTEHNATFPAR. | HHHHHHHHHHTT----EE. | aaaaaaaaaaalbxxwxb. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ga6_A_39 | 1ga6 | A | GOLGLYCEROL | Q - 47 |
1ga6_A_39 | 1ga6 | A | GOLGLYCEROL | F - 48 |
1ga6_A_39 | 1ga6 | A | GOLGLYCEROL | A - 51 |
1ga6_A_39 | 1ga6 | A | GOLGLYCEROL | N - 52 |
1j09_A_213 | 1j09 | A | GLUGLUTAMIC ACID | H - 216 |
1qu9_A_84 | 1qu9 | A | CSPS-PHOSPHOCYSTEINE | F - 84 |
1qu9_A_84 | 1qu9 | A | CSPS-PHOSPHOCYSTEINE | N - 88 |
1qu9_A_84 | 1qu9 | A | CSPS-PHOSPHOCYSTEINE | R - 105 |
Clusters included in this Subclass |
CLUSTER: HE.6.94 |