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Information on SUBCLASS 5.48.1
Subclass Accession number: 5827
Subclass: 5.48.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.1 (>50 %)  1.1.1 (>50 %)  2.8 (>75 %)  2.8.2 (>75 %)  2.8.2.4
GO : GO:0004304 (>50 %)  GO:0005496 (>50 %)  GO:0008146 (>75 %)  GO:0016782 (>75 %)  
SCOP : 51734 (>50 %)  51735 (>50 %)  51751 (>50 %)  52539 (>75 %)  52540 (>75 %)  52575 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 52.1 +/- 5.8
Average RMSD (Å) : 0.267 +/- 0.153

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: cpXXXPRhh
(φψ)-conformation: aapppwpbb
Pattern: [G][IMV][EK][QT][L][DK][DE][KMT][ENP][AS][P][R][IL][LV][K][T]
Conservation:1.470-0.557-0.280-0.8600.293-0.7050.126-1.472-1.276-0.5782.0580.882-0.287-0.5780.8820.882
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aqu_A_921aqu   A92107GIKQLKEKESPRIVKTHHHHHHT--SS-EEEEaaaaaaaxxxwxbbxb
1g3m_A_911g3m   A91106GVKQLDEMNSPRIVKTHHHHHHT--SS-EEEEaaaaaaaxxxwxbbxb
1ls6_A_921ls6   A92107GMETLKDTPAPRLLKTHHHHHHT--SS-EEEEaaaaaaaxwxwxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aqu_A_921aqu   A     ESTESTRADIOL K - 106
1g3m_A_911g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE K - 105
1g3m_A_911g3m   A     PCQ3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL K - 105
1ls6_A_921ls6   A     NPOP-NITROPHENOL T - 95
1ls6_A_921ls6   A     A3PADENOSINE-3'-5'-DIPHOSPHATE K - 106
1ls6_A_921ls6   A     NPOP-NITROPHENOL K - 106

Clusters included in this Subclass
CLUSTER: HE.7.74