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Information on SUBCLASS 5.6.4
Subclass Accession number: 5763
Subclass: 5.6.4 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.1 (>75 %)  3.1.6 (>75 %)  
GO : GO:0004065 (>50 %)  GO:0005509 (>50 %)  GO:0008484 (>75 %)  GO:0016788 (>75 %)  
SCOP : 53648 (>75 %)  53649 (>75 %)  53653 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 23.5 +/- 27.6
Average RMSD (Å) : 1.040 +/- 0.522

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XXXPpXXhX
(φψ)-conformation: aabaappbb
Pattern: [ALW][AFLY][EKP][ael]x[CER][hkm]x[CHNQ][P][DENS][LT][EPR][IV]x[FLVY]x
Conservation:-0.459-0.3310.204-0.684-0.472-0.333-0.630-0.234-0.4443.3280.3580.190-0.0221.228-0.958-0.023-0.719
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ds6_A_971ds6   A97113WFPEVRHHCPSTPIILVHHHHHHHH-TTS-EEEEaaaaaaaabaaxpbbxb
1ga8_A_121ga8   A1834AAKSVEAAHPDTEIRFHHHHHHHHH-TTS---EEaaaaaaaabaabxbbxb
1lr7_A_1131lr7   A116132LLKARCKEQPELEVQYQHHHHHHHT-TT--EEEEaaaaaaaabaaxbxabx
1ryh_A_1161ryh   A116132WYPEVRHHCPNTPIILVHHHHHHHH-SSS-EEEEaaaaaaaabaaxpbbxb
2ay1_A_1072ay1   A115131ALELARMANPDLRVFVSHHHHHHHH-TT--EEEEaaaaaaaabaaxbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ds6_A_971ds6   A     GDPGUANOSINE-5'-DIPHOSPHATE T - 115
1ga8_A_121ga8   A     MSESELENOMETHIONINE V - 22
1ga8_A_121ga8   A     MSESELENOMETHIONINE H - 26
1ga8_A_121ga8   A     MSESELENOMETHIONINE T - 29
1ga8_A_121ga8   A     MSESELENOMETHIONINE E - 30
1ga8_A_121ga8   A     MSESELENOMETHIONINE I - 31
1ga8_A_121ga8   A     MSESELENOMETHIONINE R - 32
1ga8_A_121ga8   A     MSESELENOMETHIONINE F - 33
1ga8_A_121ga8   A     MSESELENOMETHIONINE H - 34
2ay1_A_1072ay1   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 107
2ay1_A_1072ay1   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 108
2ay1_A_1072ay1   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 109
2ay1_A_1072ay1   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 110
2ay1_A_1072ay1   A     PLPPYRIDOXAL-5'-PHOSPHATE L - 112

Clusters included in this Subclass
CLUSTER: HE.6.95