Information on SUBCLASS 6.20.1 |
Subclass Accession number: 5885
Subclass: 6.20.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 16.2 +/- 23.1 Average RMSD (Å) : 0.880 +/- 0.383 Consensus geometry
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Consensus Sequence: | XpcphpXphp |
(φψ)-conformation: | aalabbppbb |
Pattern: | [rwy] | [akv] | x | [lv] | [DHQT] | [AER] | [AIL] | x | [ADEQT] | [flv] | [ALY] | [agqt] | [AEQR] | [DGR] | [EKL] | [AIV] | [KPRT] | [altv] | [et] | [ITVY] | [DEHY] |
Conservation: | -1.210 | -0.814 | -1.184 | 0.279 | -0.053 | 0.983 | 0.859 | 0.074 | -0.347 | -0.891 | -0.206 | -2.045 | 0.571 | 0.546 | 1.080 | 2.232 | 0.014 | -1.307 | 0.235 | 0.198 | 0.983 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dpg_A_433 | 1dpg | A | 440 | 460 | WKFVDAISAVYTADKAPLETY | HHHHHHHHHHHHTT-S--EEE | aaaaaaaaaaaaalabxbxbb |
1h2b_A_312 | 1h2b | A | 312 | 332 | YVELHELVTLALQGKVRVEVD | HHHHHHHHHHHHTTS----EE | aaaaaaaaaaaaavabbxxbb |
1llu_A_295 | 1llu | A | 295 | 315 | RADLQEALDFAGEGLVKATIH | HHHHHHHHHHHHTTS----EE | aaaaaaaaaaaaavabbxxbb |
1prz_A_152 | 1prz | A | 152 | 172 | VPAQTRLVESLQRREITREYE | HHHHHHHHHHHHTT-SB-EEE | aaaaaaaaaaaaalabxbbbb |
1rjw_A_289 | 1rjw | A | 289 | 309 | RKDLQEALQFAAEGKVKTIIE | HHHHHHHHHHHHTTS----EE | aaaaaaaaaaaaavabbxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h2b_A_312 | 1h2b | A | ZNZINC ION | D - 332 |
1h2b_A_312 | 1h2b | A | ZNZINC ION | I - 333 |
1h2b_A_312 | 1h2b | A | ZNZINC ION | H - 334 |
1prz_A_152 | 1prz | A | MSESELENOMETHIONINE | T - 168 |
1prz_A_152 | 1prz | A | MSESELENOMETHIONINE | R - 169 |
1prz_A_152 | 1prz | A | MSESELENOMETHIONINE | E - 170 |
1prz_A_152 | 1prz | A | MSESELENOMETHIONINE | Y - 171 |
1prz_A_152 | 1prz | A | MSESELENOMETHIONINE | E - 172 |
1prz_A_152 | 1prz | A | MSESELENOMETHIONINE | A - 173 |
1prz_A_152 | 1prz | A | MSESELENOMETHIONINE | V - 174 |
1prz_A_152 | 1prz | A | MSESELENOMETHIONINE | A - 175 |
1prz_A_152 | 1prz | A | MSESELENOMETHIONINE | I - 176 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h2b_A_312 | 1h2b | A | ZN2ZN BINDING SITE FOR CHAIN A, ADDITIONAL SITE | D - 332 |
1h2b_A_312 | 1h2b | A | ZN2ZN BINDING SITE FOR CHAIN A, ADDITIONAL SITE | H - 334 |
Clusters included in this Subclass |
CLUSTER: HE.6.82 |