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Information on SUBCLASS 6.20.1
Subclass Accession number: 5885
Subclass: 6.20.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 16.2 +/- 23.1
Average RMSD (Å) : 0.880 +/- 0.383

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XpcphpXphp
(φψ)-conformation: aalabbppbb
Pattern: [rwy][akv]x[lv][DHQT][AER][AIL]x[ADEQT][flv][ALY][agqt][AEQR][DGR][EKL][AIV][KPRT][altv][et][ITVY][DEHY]
Conservation:-1.210-0.814-1.1840.279-0.0530.9830.8590.074-0.347-0.891-0.206-2.0450.5710.5461.0802.2320.014-1.3070.2350.1980.983
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dpg_A_4331dpg   A440460WKFVDAISAVYTADKAPLETYHHHHHHHHHHHHTT-S--EEEaaaaaaaaaaaaalabxbxbb
1h2b_A_3121h2b   A312332YVELHELVTLALQGKVRVEVDHHHHHHHHHHHHTTS----EEaaaaaaaaaaaaavabbxxbb
1llu_A_2951llu   A295315RADLQEALDFAGEGLVKATIHHHHHHHHHHHHHTTS----EEaaaaaaaaaaaaavabbxxbb
1prz_A_1521prz   A152172VPAQTRLVESLQRREITREYEHHHHHHHHHHHHTT-SB-EEEaaaaaaaaaaaaalabxbbbb
1rjw_A_2891rjw   A289309RKDLQEALQFAAEGKVKTIIEHHHHHHHHHHHHTTS----EEaaaaaaaaaaaaavabbxxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h2b_A_3121h2b   A     ZNZINC ION D - 332
1h2b_A_3121h2b   A     ZNZINC ION I - 333
1h2b_A_3121h2b   A     ZNZINC ION H - 334
1prz_A_1521prz   A     MSESELENOMETHIONINE T - 168
1prz_A_1521prz   A     MSESELENOMETHIONINE R - 169
1prz_A_1521prz   A     MSESELENOMETHIONINE E - 170
1prz_A_1521prz   A     MSESELENOMETHIONINE Y - 171
1prz_A_1521prz   A     MSESELENOMETHIONINE E - 172
1prz_A_1521prz   A     MSESELENOMETHIONINE A - 173
1prz_A_1521prz   A     MSESELENOMETHIONINE V - 174
1prz_A_1521prz   A     MSESELENOMETHIONINE A - 175
1prz_A_1521prz   A     MSESELENOMETHIONINE I - 176
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h2b_A_3121h2b   A ZN2ZN BINDING SITE FOR CHAIN A, ADDITIONAL SITED - 332
1h2b_A_3121h2b   A ZN2ZN BINDING SITE FOR CHAIN A, ADDITIONAL SITEH - 334

Clusters included in this Subclass
CLUSTER: HE.6.82